RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 OR4K5Q8NGD3 323 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 OR10D3Q8NH80 312 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 TMEM255BQ8WV15 326 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 RND1Q92730 232 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 CPNE4Q96A23 557 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-218ENST00000555213 ZFP3Q96NJ6 502 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 TM9SF2Q99805 663 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 DGCR6LQ9BY27 220 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 ANKRD60Q9BZ19 345 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 PRRG4Q9BZD6 226 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 COQ3Q9NZJ6 369 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 SLC7A7Q9UM01 511 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 LRCH1Q9Y2L9 728 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 HDGFL3Q9Y3E1 203 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 FAM215AQ9Y5M1 114 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 BSNQ9UPA5 3926 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 DNAJC13O75165 2243 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 TENM4Q6N022 2769 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 ESPL1Q14674 2120 aa9.79□□□□□ -0.84
SHMT2-218ENST00000555213 LOC100130705A0A1B0GUX0 176 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 TMEM72A0PK05 275 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 A8MVM7 634 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 SULT2B1O00204 365 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 DNPH1O43598 174 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 CHP2O43745 196 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 CXCL13O43927 109 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 AHSA1O95433 338 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 IL2RAP01589 272 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 OPN1LWP04000 364 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 POU2F1P14859 743 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 MYF6P23409 242 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 IGFBP5P24593 272 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 GTF2E2P29084 291 aaKnown RBP9.78□□□□□ -0.84
SHMT2-218ENST00000555213 IDUAP35475 653 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 GSSP48637 474 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 SUCLG1P53597 346 aaKnown RBP9.78□□□□□ -0.84
SHMT2-218ENST00000555213 UGT2B15P54855 530 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 NPRL3Q12980 569 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 PON3Q15166 354 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 CTU2Q2VPK5 515 aaKnown RBP9.78□□□□□ -0.84
SHMT2-218ENST00000555213 FGD3Q5JSP0 725 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 OR2A2Q6IF42 318 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 MBOAT2Q6ZWT7 520 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 ADGRG3Q86Y34 549 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 KIF18BQ86Y91 864 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 MCEMP1Q8IX19 187 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 ATG16L2Q8NAA4 619 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 AQP11Q8NBQ7 271 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 ACOT11Q8WXI4 607 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-218ENST00000555213 WNT2BQ93097 391 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 SLC38A4Q969I6 547 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 UBE2FQ969M7 185 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 CCDC120Q96HB5 630 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 MPP4Q96JB8 637 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 ADGRG7Q96K78 797 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 MUS81Q96NY9 551 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 UCN2Q96RP3 112 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 DMRTA2Q96SC8 542 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 TTYH2Q9BSA4 534 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 TAPBPLQ9BX59 468 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 GABARAPL3Q9BY60 117 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 VCXQ9H320 206 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 MEPEQ9NQ76 525 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-218ENST00000555213 CLCF1Q9UBD9 225 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 NDRG4Q9ULP0 352 aaKnown RBP9.78□□□□□ -0.84
SHMT2-218ENST00000555213 TMCC3Q9ULS5 477 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 MGAT4BQ9UQ53 548 aa9.78□□□□□ -0.84
SHMT2-218ENST00000555213 A0A087WUJ7 227 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 A0A0J9YW62 118 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 MBD3L4A6NDZ8 208 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-218ENST00000555213 MBD3L3A6NE82 208 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-218ENST00000555213 MBD3L5A6NJ08 208 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-218ENST00000555213 HSPB2A8KAH6 182 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 H0YC42 278 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 EFNA2O43921 213 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 PIP5K1CO60331 668 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 PMS2P2O95744 297 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 PLGP00747 810 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-218ENST00000555213 GLI4P10075 376 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 MAKP20794 623 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 SHC1P29353 583 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 TIMP3P35625 211 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 DIO1P49895 249 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 TPD52P55327 224 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-218ENST00000555213 NUP107P57740 925 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 RAC3P60763 192 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 ISL1P61371 349 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 SLC35A1P78382 337 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 MYBPC1Q00872 1141 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 PRKCDQ05655 676 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 PMPCAQ10713 525 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 MYBPHQ13203 477 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 MED21Q13503 144 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 FHL1Q13642 323 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 PDK3Q15120 406 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 HSPB2Q16082 182 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 ZNF239Q16600 458 aaKnown RBP9.77□□□□□ -0.85
SHMT2-218ENST00000555213 RFX4Q33E94 735 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 RIPPLY2Q5TAB7 128 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 EEF1A1P5Q5VTE0 462 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms