RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 NHLRC1Q6VVB1 395 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 GRINAQ7Z429 371 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 IGFN1Q86VF2 1251 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 ARIH2OSQ8N7S6 290 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 TMEM99Q8N816 258 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 STK35Q8TDR2 534 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 CT55Q8WUE5 264 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 BORCS5Q969J3 196 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 RNF166Q96A37 237 aaPredicted RBP8.06□□□□□ -1.12
TDP1-210ENST00000554976 FANCFQ9NPI8 374 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 AKIP1Q9NQ31 210 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 ZMIZ1Q9ULJ6 1067 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 SLC6A5Q9Y345 797 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 PTRH2Q9Y3E5 179 aaKnown RBP8.06□□□□□ -1.12
TDP1-210ENST00000554976 TRAV36DV7A0A075B6V5 113 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 SNTNA6NMZ2 147 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 AIREO43918 545 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 GAAP10253 952 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 ENTPD1P49961 510 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 C17orf67Q0P5P2 114 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 MED22Q15528 200 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 C1QL3Q5VWW1 255 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 OR10G3Q8NGC4 313 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 DUSP19Q8WTR2 217 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 ST8SIA1Q92185 356 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 TMCO6Q96DC7 493 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 SPACA9Q96E40 222 aaPredicted RBP8.06□□□□□ -1.12
TDP1-210ENST00000554976 TSPAN32Q96QS1 320 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 PALMDQ9NP74 551 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 TMEM9BQ9NQ34 198 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 RYDENQ9NUL5 291 aaKnown RBP8.06□□□□□ -1.12
TDP1-210ENST00000554976 SEC14L4Q9UDX3 406 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 GPN3Q9UHW5 284 aaPredicted RBP8.06□□□□□ -1.12
TDP1-210ENST00000554976 ERGIC3Q9Y282 383 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 TMED7-TICAM2A0A0A6YYA0 188 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 OR6C68A6NDL8 312 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 FOXD2O60548 495 aaPredicted RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 DXOO77932 396 aaKnown RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 BCL10O95999 233 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 TFP02787 698 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 ENPP1P22413 925 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 S100A5P33763 92 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 CASP3P42574 277 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 BDH1Q02338 343 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 PLPPR5Q32ZL2 321 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 MESTQ5EB52 335 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 NDUFAF7Q7L592 441 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 RAB11FIP2Q7L804 512 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 WDSUB1Q8N9V3 476 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 PSD4Q8NDX1 1056 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 PRSS33Q8NF86 280 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 ZNF519Q8TB69 540 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 RPS4Y2Q8TD47 263 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 THAP3Q8WTV1 239 aaPredicted RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 TEX12Q9BXU0 123 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 CCDC59Q9P031 241 aaKnown RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 TCFL5Q9UL49 500 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 TMED7Q9Y3B3 224 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 IER3IP1Q9Y5U9 82 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 WIF1Q9Y5W5 379 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 METTL15A6NJ78 407 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 PRR33A8MZF0 331 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 PRR23D1E9PI22 279 aaPredicted RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 LRRTM2O43300 516 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 SUSD5O60279 629 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 NOL3O60936 208 aaKnown RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 IGHEP01854 428 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 PRR23D2P0DMB1 279 aaPredicted RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 ZNF3P17036 446 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 AQP2P41181 271 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 CDKN2AP42771 156 aaKnown RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 RPS5P46782 204 aaKnown RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 SLC25A1P53007 311 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 MLF1P58340 268 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 RPL18Q07020 188 aaKnown RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 IL10RAQ13651 578 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 CSRP2Q16527 193 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.05□□□□□ -1.12
TDP1-210ENST00000554976 EMC4Q5J8M3 183 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 ZNF322Q6U7Q0 402 aaPredicted RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 ARSKQ6UWY0 536 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 C6orf15Q6UXA7 325 aaPredicted RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 B3GLCTQ6Y288 498 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 WDFY1Q8IWB7 410 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 CENPSQ8N2Z9 138 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 RFLNBQ8N5W9 214 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 OR2M3Q8NG83 312 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 ZNF563Q8TA94 476 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 ADAMTS17Q8TE56 1095 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 ERMAPQ96PL5 475 aaPredicted RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 B3GNT4Q9C0J1 378 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 ISG20L2Q9H9L3 353 aaKnown RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 INPP5EQ9NRR6 644 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 TAS2R10Q9NYW0 307 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 SDK1Q7Z5N4 2213 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 SLC22A31A6NKX4 558 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 ITGA10O75578 1167 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 MT-ATP6P00846 226 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 SBK2P0C263 348 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 IL11P20809 199 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms