RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 STYXL1Q9Y6J8 313 aa4.29□□□□□ -1.72
ATXN3-218ENST00000553309 FER1L5A0AVI2 2057 aa4.29□□□□□ -1.72
ATXN3-218ENST00000553309 ANK2Q01484 3957 aa4.29□□□□□ -1.72
ATXN3-218ENST00000553309 IGHV1OR21-1A0A087WYE8 117 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 A0A0U1RQV5 110 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 XKRY2A2RUG3 117 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 A8MUI8 341 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 NR5A2O00482 541 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 CLDN4O14493 209 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 NUPL2O15504 423 aaKnown RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 GPRIN2O60269 458 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 OTCP00480 354 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 OR4E1P0C645 316 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 SAGP10523 405 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 ADRB3P13945 408 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 GNB3P16520 340 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 TCN1P20061 433 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 CMA1P23946 247 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 EPHA2P29317 976 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 CHRNA3P32297 505 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 UGT2B10P36537 528 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 CD79BP40259 229 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 CAMPP49913 170 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 ERFP50548 548 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 CAPZA1P52907 286 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 GBX2P52951 348 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 YBEYP58557 167 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 TAS2R60P59551 318 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 YWHAGP61981 247 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 SPOCK1Q08629 439 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 MAMLD1Q13495 774 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 CAMK2DQ13557 499 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 ZNF235Q14590 738 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 PON3Q15166 354 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 IRF4Q15306 451 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 KIAA1644Q3SXP7 199 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 NANOGP8Q6NSW7 305 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 FAM199XQ6PEV8 388 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 BHLHB9Q6PI77 547 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 CFAP77Q6ZQR2 320 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 LINC00299Q6ZSB3 139 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 NOTCH2NLQ7Z3S9 236 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 TIGD4Q8IY51 512 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 SPATA4Q8NEY3 305 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 OR5T1Q8NG75 326 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 OR5T2Q8NGG2 359 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 OR5H6Q8NGV6 325 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 DTD1Q8TEA8 209 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 DNAJA4Q8WW22 397 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 PIK3R3Q92569 461 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 UFD1Q92890 307 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 PTP4A1Q93096 173 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 TESCQ96BS2 214 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 ZNF285Q96NJ3 590 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 ZNF317Q96PQ6 595 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 BTBD9Q96Q07 612 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 TRNT1Q96Q11 434 aaKnown RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 TREX2Q9BQ50 279 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 ECSITQ9BQ95 431 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 ZNF251Q9BRH9 671 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 CBWD1Q9BRT8 395 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 PELOQ9BRX2 385 aaKnown RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 ITPAQ9BY32 194 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 SLC26A1Q9H2B4 701 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 COG4Q9H9E3 785 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 AKIRIN1Q9H9L7 192 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 TREM1Q9NP99 234 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 IL26Q9NPH9 171 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 NDE1Q9NXR1 346 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 COA4Q9NYJ1 87 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 NPAP1Q9NZP6 1156 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 EIF3KQ9UBQ5 218 aaKnown RBP4.28□□□□□ -1.72
ATXN3-218ENST00000553309 DCDC2Q9UHG0 476 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 CMAHPQ9Y471 501 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 SLC22A7Q9Y694 548 aa4.28□□□□□ -1.72
ATXN3-218ENST00000553309 LRP4O75096 1905 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 IGKV3D-15A0A087WSY6 115 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 TLCD2A6NGC4 264 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF729A6NN14 1252 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-218ENST00000553309 C12orf71A8MTZ7 269 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 TFECO14948 347 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-218ENST00000553309 SLC31A2O15432 143 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 SNX3O60493 162 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 FMO6PO60774 539 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 OR6B1O95007 311 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 RPP14O95059 124 aaKnown RBP4.27□□□□□ -1.73
ATXN3-218ENST00000553309 TGM6O95932 706 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 MOCS2O96007 188 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-218ENST00000553309 IFNB1P01574 187 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 IFNA4P05014 189 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 CDK1P06493 297 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 TRIM49P0CI25 452 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 TRIM49CP0CI26 452 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 UQCRBP14927 111 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 CYP11B1P15538 503 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 CPN2P22792 545 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 CA5AP35218 305 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 HMGCLP35914 325 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 PRRX1P54821 245 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms