RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 ACSL3O95573 720 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 KCNE1P15382 129 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 NPR2P20594 1047 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 SHMT2P34897 504 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 CFHR2P36980 270 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 TNFSF10P50591 281 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 DUSP3P51452 185 aaPredicted RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ADPRHP54922 357 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 FGF8P55075 233 aaPredicted RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 CDC42P60953 191 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 RAP1BP61224 184 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 AESQ08117 197 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 PJVKQ0ZLH3 352 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 BNIP2Q12982 314 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 SRSF6Q13247 344 aaKnown RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 RAB31Q13636 194 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 MESDQ14696 234 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 POU6F1Q14863 301 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 RNPS1Q15287 305 aaKnown RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 IRF4Q15306 451 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 P2RY14Q15391 338 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 SPA17Q15506 151 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 TAF1AQ15573 450 aaPredicted RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ACKR1Q16570 336 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 DUSP7Q16829 419 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ODF4Q2M2E3 257 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ARMCX4Q5H9R4 360 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 GCSAMLQ5JQS6 135 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 SPIN3Q5JUX0 258 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 OR2A2Q6IF42 318 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 KCNIP4Q6PIL6 250 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 RHBDF2Q6PJF5 856 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ZNF589Q86UQ0 364 aaPredicted RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 SATL1Q86VE3 508 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 PTOV1Q86YD1 416 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 STHQ8IWL8 128 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ARHGAP24Q8N264 748 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ZCCHC9Q8N567 271 aaKnown RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 HORMAD2Q8N7B1 307 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 C8orf31Q8N9H6 132 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 LGALS14Q8TCE9 139 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 MAGEE2Q8TD90 523 aaPredicted RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 MCHR2Q969V1 340 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 TMEM45BQ96B21 275 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 EXOSC8Q96B26 276 aaKnown RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 C8orf44Q96CB5 159 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 TRMT61AQ96FX7 289 aaKnown RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 FAR2Q96K12 515 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 SPATA33Q96N06 139 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 RASL10BQ96S79 203 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 PFDN5Q99471 154 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 SEPHS2Q99611 448 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 TIMM29Q9BSF4 260 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 TRIM9Q9C026 710 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 WWTR1Q9GZV5 400 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 NAT10Q9H0A0 1025 aaKnown RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 SLA2Q9H6Q3 261 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 IFT46Q9NQC8 304 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 SLC2A9Q9NRM0 540 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 BABAM1Q9NWV8 329 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ANKRD10Q9NXR5 420 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 RAB21Q9UL25 225 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 RAB26Q9ULW5 256 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 NPIPA1Q9UND3 350 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 PDE10AQ9Y233 779 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 MEMO1Q9Y316 297 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 HEMK1Q9Y5R4 338 aaPredicted RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 SIRT4Q9Y6E7 314 aaPredicted RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 WNK3Q9BYP7 1800 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ALS2Q96Q42 1657 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 COL24A1Q17RW2 1714 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 KNDC1Q76NI1 1749 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ARHGEF28Q8N1W1 1705 aaKnown RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 PEAK1Q9H792 1746 aa5.68□□□□□ -1.5
LETMD1-233ENST00000552433 TRPM3Q9HCF6 1732 aaPredicted RBP5.68□□□□□ -1.5
LETMD1-233ENST00000552433 ARHGEF10O15013 1369 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 CEMIPQ8WUJ3 1361 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 DAPK1P53355 1430 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 KBTBD11-OT1A0A1B0GTJ5 212 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 SH3PXD2BA1X283 911 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 ZNF840PA6NDX5 716 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 FAM25AB3EWG3 89 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 FAM25CB3EWG5 89 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 FAM25GB3EWG6 89 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 B4DGG1 531 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 LOC110117498-PIK3R3F6TDL0 507 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 M0R296 226 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 DFFAO00273 331 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 PRMT5O14744 637 aaPredicted RBP5.67□□□□□ -1.5
LETMD1-233ENST00000552433 TXNDC12O95881 172 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 MBPP02686 304 aaPredicted RBP5.67□□□□□ -1.5
LETMD1-233ENST00000552433 ALDOAP04075 364 aaKnown RBP5.67□□□□□ -1.5
LETMD1-233ENST00000552433 SFTPBP07988 381 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 CPN1P15169 458 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 ZNF182P17025 639 aaPredicted RBP5.67□□□□□ -1.5
LETMD1-233ENST00000552433 CSNK2A2P19784 350 aaPredicted RBP5.67□□□□□ -1.5
LETMD1-233ENST00000552433 ACADLP28330 430 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 CCR7P32248 378 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 PBX1P40424 430 aa5.67□□□□□ -1.5
LETMD1-233ENST00000552433 EIF2B2P49770 351 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms