RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 OVCH1Q7RTY7 1134 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 CADM3Q8N126 398 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 GHDCQ8N2G8 530 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 SYS1Q8N2H4 156 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 NLGN4YQ8NFZ3 816 aaPredicted RBP12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 OR5J2Q8NH18 312 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 ABHD4Q8TB40 342 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 HTRA1Q92743 480 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 NAT6Q93015 286 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 DIRAS2Q96HU8 199 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 RNF32Q9H0A6 362 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 SYNDIG1Q9H7V2 258 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 FKRPQ9H9S5 495 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 ST6GALNAC2Q9UJ37 374 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 FABP12A6NFH5 140 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 BOLA2-SMG1P6H3BVE0 249 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 LAMTOR5O43504 91 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 SCO2O43819 266 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 ALOX12BO75342 701 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 GLCEO94923 617 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 NUDT14O95848 222 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 DLGAP3O95886 979 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 ONECUT2O95948 504 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 HIST1H2ABP04908 130 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 SPNP16150 400 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 PYCR1P32322 319 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 EVI2BP34910 448 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 P2RX1P51575 399 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 SLC25A1P53007 311 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 NRG3P56975 720 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 ACTA2P62736 377 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 PPP3R1P63098 170 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 ACTG2P63267 376 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 RPL18Q07020 188 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 CBFBQ13951 182 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 CDONQ4KMG0 1287 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 TP53I3Q53FA7 332 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 FAM131AQ6UXB0 335 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 RPTNQ6XPR3 784 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 GDPD3Q7L5L3 318 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 HIST3H2AQ7L7L0 130 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 NANOGNBQ7Z5D8 188 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 JAZF1Q86VZ6 243 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 APCDD1LQ8NCL9 501 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 HIST1H2ACQ93077 130 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 COMMD3Q9UBI1 195 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 PCNX3Q9H6A9 2034 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 OGG1O15527 345 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 BGLAPP02818 100 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 F13BP05160 661 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 CFL1P23528 166 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 SDHAP31040 664 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 RPS5P46782 204 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 GBX2P52951 348 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 EMC4Q5J8M3 183 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 PEAR1Q5VY43 1037 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 ZNF385CQ66K41 422 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 EXD3Q8N9H8 876 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 LSM14AQ8ND56 463 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 GPR119Q8TDV5 335 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 PGLYRP3Q96LB9 341 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 MESP1Q9BRJ9 268 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 TTTY10Q9BZA0 68 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 NDEL1Q9GZM8 345 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 PPIEQ9UNP9 301 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 NPFFR2Q9Y5X5 522 aa12.74□□□□□ -0.37
RAB3IP-216ENST00000552199 ASCC3Q8N3C0 2202 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 TRAV36DV7A0A075B6V5 113 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 VSTM2BA6NLU5 285 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 C4orf47A7E2U8 309 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 ADAM10O14672 748 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 SELENOFO60613 162 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 SERPINI2O75830 405 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 SC5DO75845 299 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 SHC1P29353 583 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 ACVR1BP36896 505 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 POLR2HP52434 150 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 EMP2P54851 167 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 EFR3AQ14156 821 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 BAK1Q16611 211 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 LINC01590Q5TEZ4 76 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 MZT2AQ6P582 158 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 POMZP3Q6PJE2 187 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 C16orf47Q6ZP98 133 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 CEACAM19Q7Z692 300 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 MAML2Q8IZL2 1156 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 OR6K6Q8NGW6 343 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 SETD6Q8TBK2 473 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 METTL21AQ8WXB1 218 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 TMCO6Q96DC7 493 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 PELI1Q96FA3 418 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 ALG12Q9BV10 488 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 PPIL3Q9H2H8 161 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 TIGARQ9NQ88 270 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 RPRD1BQ9NQG5 326 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 NCDNQ9UBB6 729 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 TBC1D24Q9ULP9 559 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 COPS3Q9UNS2 423 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 MOKQ9UQ07 419 aa12.73□□□□□ -0.37
RAB3IP-216ENST00000552199 GRIP1Q9Y3R0 1128 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms