RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 LAMP3Q9UQV4 416 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 TMEM247A6NEH6 219 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 FXYD1O00168 92 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 ABCD4O14678 606 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 ARHGEF9O43307 516 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 NDUFS7O75251 213 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 MFN2O95140 757 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 LYPD3O95274 346 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 RPS5P46782 204 aaKnown RBP11.42□□□□□ -0.58
NPAS3-209ENST00000551008 SELENOPP49908 381 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 ZNF83P51522 516 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 COPZ1P61923 177 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 LTBQ06643 244 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 NPTX1Q15818 432 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 NHLRC1Q6VVB1 395 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 CREB3L2Q70SY1 520 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 BIVMQ86UB2 503 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 DTX2Q86UW9 622 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 KDM8Q8N371 416 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 OR4D11Q8NGI4 311 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 MFSD8Q8NHS3 518 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 SMAP2Q8WU79 429 aaPredicted RBP11.42□□□□□ -0.58
NPAS3-209ENST00000551008 TAAR8Q969N4 342 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 FBXW5Q969U6 566 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 CGREF1Q99674 301 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 TRAF4Q9BUZ4 470 aaPredicted RBP11.42□□□□□ -0.58
NPAS3-209ENST00000551008 SLCO5A1Q9H2Y9 848 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 NELFAQ9H3P2 528 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 C12orf10Q9HB07 376 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 NGBQ9NPG2 151 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 SLC17A5Q9NRA2 495 aa11.42□□□□□ -0.58
NPAS3-209ENST00000551008 LEF1Q9UJU2 399 aaPredicted RBP11.42□□□□□ -0.58
NPAS3-209ENST00000551008 CIB4A0PJX0 185 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 CCT8L1PA6NM43 557 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 C5orf58C9J3I9 102 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 E7EQL1 145 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 ZNF432O94892 652 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 AHSA1O95433 338 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 LY6G6DO95868 133 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 THY1P04216 161 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 PTNP21246 168 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 CD40P25942 277 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 CDKN1AP38936 164 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 RPS4XP62701 263 aaKnown RBP11.41□□□□□ -0.58
NPAS3-209ENST00000551008 KRTAP1-1Q07627 177 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 DUSP7Q16829 419 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 C11orf71Q6IPW1 123 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 DNM1P46Q6ZS02 220 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 AAED1Q7RTV5 226 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 HIPK4Q8NE63 616 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 C1orf162Q8NEQ5 155 aaPredicted RBP11.41□□□□□ -0.58
NPAS3-209ENST00000551008 SLC38A4Q969I6 547 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 MUCL1Q96DR8 90 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 BOD1Q96IK1 185 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 C1QTNF6Q9BXI9 259 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 TMEM120AQ9BXJ8 343 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 PIF1Q9H611 641 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 KAT8Q9H7Z6 458 aaKnown RBP11.41□□□□□ -0.58
NPAS3-209ENST00000551008 ARGLU1Q9NWB6 273 aaPredicted RBP11.41□□□□□ -0.58
NPAS3-209ENST00000551008 KLHL14Q9P2G3 628 aa11.41□□□□□ -0.58
NPAS3-209ENST00000551008 A0A0B4J2E0 115 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 A0A0G2JND7 137 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 A0A1B0GX12 115 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 ELOA3DA6NLF2 546 aaPredicted RBP11.4□□□□□ -0.58
NPAS3-209ENST00000551008 M0R082 166 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 M0R3H8 397 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 TRAF3IP2O43734 574 aaPredicted RBP11.4□□□□□ -0.58
NPAS3-209ENST00000551008 TMCC2O75069 709 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 UPK3AO75631 287 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 HPRP00739 348 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 OPN1SWP03999 348 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 CD247P20963 164 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 MPGP29372 298 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 CDH11P55287 796 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 ATP5J2P56134 94 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 NRF1Q16656 503 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 ELOA3BQ3SY89 546 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 HIKESHIQ53FT3 197 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 WDR88Q6ZMY6 472 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 GPAT4Q86UL3 456 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 RBM45Q8IUH3 476 aaKnown RBP11.4□□□□□ -0.58
NPAS3-209ENST00000551008 SMYD1Q8NB12 490 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 ELOA3Q8NG57 546 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 ZNF417Q8TAU3 575 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 TSPEARQ8WU66 669 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 SLC25A36Q96CQ1 311 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 ALKBH3Q96Q83 286 aaPredicted RBP11.4□□□□□ -0.58
NPAS3-209ENST00000551008 ZNF587Q96SQ5 575 aaPredicted RBP11.4□□□□□ -0.58
NPAS3-209ENST00000551008 ARHGDIGQ99819 225 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 TAPBPLQ9BX59 468 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 RABEP2Q9H5N1 569 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 CXorf56Q9H5V9 222 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 ARMC7Q9H6L4 198 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 PARPBPQ9NWS1 579 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 CISD1Q9NZ45 108 aaKnown RBP11.4□□□□□ -0.58
NPAS3-209ENST00000551008 TESQ9UGI8 421 aaKnown RBP11.4□□□□□ -0.58
NPAS3-209ENST00000551008 USP22Q9UPT9 525 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 RASD1Q9Y272 281 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 NDUFAF1Q9Y375 327 aa11.4□□□□□ -0.58
NPAS3-209ENST00000551008 HIVEP2P31629 2446 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms