RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 LY6HO94772 140 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 GKN3PP0CG01 181 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 BGNP21810 368 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 CRATP43155 626 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 MST1LQ2TV78 715 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 C3orf36Q3SXR2 165 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 NIPAL3Q6P499 406 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 CREB3L2Q70SY1 520 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 OR4F15Q8NGB8 312 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 C3orf49Q96BT1 292 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 CENPHQ9H3R5 247 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 CHODLQ9H9P2 273 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 PNPOQ9NVS9 261 aa20.12■□□□□ 0.81
SMARCD1-209ENST00000550477 IGHV1-18A0A0C4DH31 117 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 VWC2LB2RUY7 222 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 AHSA1O95433 338 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 LGI1O95970 557 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 TFPTP0C1Z6 253 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 CDKN2CP42773 168 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 SH3BGRP55822 239 aaPredicted RBP20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 SQLEQ14534 574 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 COX20Q5RI15 118 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 C1orf140Q5VVS0 124 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 WDR93Q6P2C0 686 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 ANKRD16Q6P6B7 361 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 CROCCP2Q86T23 111 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 MAGEE2Q8TD90 523 aaPredicted RBP20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 STK35Q8TDR2 534 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 TEX37Q96LM6 180 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 FOXN4Q96NZ1 517 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 SORCS2Q96PQ0 1159 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 RMND5AQ9H871 391 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 IFT52Q9Y366 437 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 MALRD1Q5VYJ5 2156 aa20.11■□□□□ 0.81
SMARCD1-209ENST00000550477 ARPC4-TTLL3A0A0A6YYG9 625 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 OR4A8P0C604 315 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 ZNF43P17038 809 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 ACAA2P42765 397 aaKnown RBP20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 BNIP2Q12982 314 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 RNF220Q5VTB9 566 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 HHATQ5VTY9 493 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 LIPNQ5VXI9 398 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 ZNF836Q6ZNA1 936 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 VRK2Q86Y07 508 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 FAM169BQ8N8A8 192 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 LINC00470Q9BZP3 86 aa20.1■□□□□ 0.81
SMARCD1-209ENST00000550477 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.09■□□□□ 0.812e-8■■■■□ 24.2
SMARCD1-209ENST00000550477 A0A0G2JPF8 293 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 HNRNPCL2B2RXH8 293 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 HNRNPCL3B7ZW38 293 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 SLCO1B7G3V0H7 640 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 HNRNPCL1O60812 293 aaKnown RBP20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 TGFAP01135 160 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 BCHEP06276 602 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 ALDOCP09972 364 aaKnown RBP20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 HNRNPCL4P0DMR1 293 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 IDO1P14902 403 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 SELENOPP49908 381 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 DSTNP60981 165 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 NAAAQ02083 359 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 EFNB3Q15768 340 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 FAM120AOSQ5T036 256 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 VHLLQ6RSH7 139 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 MREGQ8N565 214 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 ANKK1Q8NFD2 765 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 MFSD8Q8NHS3 518 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 BCL2L2Q92843 193 aaPredicted RBP20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 ALKBH3Q96Q83 286 aaPredicted RBP20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 RPS6KB2Q9UBS0 482 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 ZNF443Q9Y2A4 671 aaPredicted RBP20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 GPR45Q9Y5Y3 372 aa20.09■□□□□ 0.81
SMARCD1-209ENST00000550477 SDHDO14521 159 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 HDAC3O15379 428 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 FRS3O43559 492 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 SLC22A3O75751 556 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 IGFBP5P24593 272 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 IL12AP29459 219 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 PPOXP50336 477 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 IDH3GP51553 393 aaPredicted RBP20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 BST1Q10588 318 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 NXNQ6DKJ4 435 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 ARIH2OSQ8N7S6 290 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 IL17RDQ8NFM7 739 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 NEU4Q8WWR8 484 aaPredicted RBP20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 SLC25A36Q96CQ1 311 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 MSI2Q96DH6 328 aaKnown RBP20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 ANKRD27Q96NW4 1050 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 SPATA9Q9BWV2 254 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 PLK3Q9H4B4 646 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 TPT1P8Q9HAU6 139 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 CRNNQ9UBG3 495 aaPredicted RBP20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 PCDHB14Q9Y5E9 798 aa20.08■□□□□ 0.81
SMARCD1-209ENST00000550477 DSPPQ9NZW4 1301 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 A0A096LPE4 126 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 A0A1W2PPZ6 126 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 AKAP8O43823 692 aaKnown RBP20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 OR2T1O43869 369 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 SLC43A1O75387 559 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 C1QCP02747 245 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 ZCCHC18P0CG32 403 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms