RNA–Protein interactions for RNA: ENST00000550464.5

PMEL-215, Transcript of premelanosome protein, human

APPRIS ALT2 TSL 2 BASIC

Gene PMEL, Length 1,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMEL-215	ENST00000550464	FXYD6P3	P58550	94 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	RPS25	P62851	125 aa	Known RBP	11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	ULK3	Q6PHR2	472 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	PAPD4	Q6PIY7	484 aa	Known RBP	11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	MEPCE	Q7L2J0	689 aa	Known RBP	11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	POC5	Q8NA72	575 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	OR51G2	Q8NGK0	314 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	OR13C2	Q8NGS9	318 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	WDFY2	Q96P53	400 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	BARHL1	Q9BZE3	327 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	ZNF700	Q9H0M5	742 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	OR10A5	Q9H207	317 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	ERVK-19	Q9WJR5	959 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	POLH	Q9Y253	713 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	SIGLEC7	Q9Y286	467 aa		11.65	□□□□□ -0.54
PMEL-215	ENST00000550464	NSG1	A0A0A6YYJ2	146 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464		A0A1W2PQ72	361 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	FAM183A	A6NL82	134 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	C17orf105	B2RV13	164 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	CTDSP2	O14595	271 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	DYRK3	O43781	588 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	IGKV1D-16	P01601	117 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	HLA-DPB1	P04440	258 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	GPR143	P51810	404 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	ATP12A	P54707	1039 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	TPTE	P56180	551 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	BDH1	Q02338	343 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	PLAUR	Q03405	335 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	CD300C	Q08708	224 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464		Q0VFX4	171 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	FUT7	Q11130	342 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	DCAF10	Q5QP82	559 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	NPSR1	Q6W5P4	371 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	OAF	Q86UD1	273 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	ZNF485	Q8NCK3	441 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	OR4N2	Q8NGD1	307 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	IMMP1L	Q96LU5	166 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	IP6K3	Q96PC2	410 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	LPAR4	Q99677	370 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	ZNF426	Q9BUY5	554 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	POLE4	Q9NR33	117 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	INPP5E	Q9NRR6	644 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	FLRT3	Q9NZU0	649 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	TRAPPC4	Q9Y296	219 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	CAB39	Q9Y376	341 aa	Predicted RBP	11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	SF3B6	Q9Y3B4	125 aa	Known RBP	11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	CMAHP	Q9Y471	501 aa		11.64	□□□□□ -0.55
PMEL-215	ENST00000550464	TRDV1	A0A1B0GX56	115 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	NPIPB9	F8W1W9	429 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	HRK	O00198	91 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	IFNG	P01579	166 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	APOA1	P02647	267 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	FUT1	P19526	365 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	GTF2E2	P29084	291 aa	Known RBP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	NOS3	P29474	1203 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	SLC6A6	P31641	620 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	TNFSF8	P32971	234 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	ACAA2	P42765	397 aa	Known RBP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	PSPH	P78330	225 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	MXD1	Q05195	221 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	HNRNPA0	Q13151	305 aa	Known RBP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	ELAVL1	Q15717	326 aa	Known RBP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	SLC35F1	Q5T1Q4	408 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	ARHGAP11A	Q6P4F7	1023 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	CD200R1L	Q6Q8B3	271 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	ZNF322	Q6U7Q0	402 aa	Predicted RBP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	RTL4	Q6ZR62	310 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	ZNF440	Q8IYI8	595 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	CADM2	Q8N3J6	435 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	ACBD7	Q8N6N7	88 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	SIRT6	Q8N6T7	355 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	ZNF321P	Q8N8H1	164 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	OR7G1	Q8NGA0	311 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	C16orf52	Q8NHV5	167 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	OIT3	Q8WWZ8	545 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	HOXD1	Q9GZZ0	328 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	RERGL	Q9H628	205 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	MEPE	Q9NQ76	525 aa	Predicted RBP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	QPCTL	Q9NXS2	382 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	SLC35A3	Q9Y2D2	325 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	DTX4	Q9Y2E6	619 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	KCNMB2	Q9Y691	235 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	CLCA3P	Q9Y6N3	262 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	PTPRQ	Q9UMZ3	2332 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	DSP	P15924	2871 aa	Known RBP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	TRAV27	A0A087WT01	109 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	FAM172BP	A6NC97	362 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	SYNDIG1L	A6NDD5	238 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464		J3QRE1	110 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	HP	P00738	406 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	HK1	P19367	917 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	CAPZA2	P47755	286 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	RPS7	P62081	194 aa	Known RBP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	COL28A1	Q2UY09	1125 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	BTBD16	Q32M84	506 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	ZNF791	Q3KP31	576 aa	Predicted RBP	11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	KLHL12	Q53G59	568 aa		11.63	□□□□□ -0.55
PMEL-215	ENST00000550464	NANOGNB	Q7Z5D8	188 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms