RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 BIVMQ86UB2 503 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 EGFL6Q8IUX8 553 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 CCDC50Q8IVM0 306 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 CLEC4FQ8N1N0 589 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 BPIFB2Q8N4F0 458 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 MFSD9Q8NBP5 474 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 SPATA4Q8NEY3 305 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 OR6C4Q8NGE1 309 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 OR51G2Q8NGK0 314 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 CNIH3Q8TBE1 160 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 IL1F10Q8WWZ1 152 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 COPS8Q99627 209 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 NIPSNAP3BQ9BS92 247 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 VCXQ9H320 206 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 SIGLEC8Q9NYZ4 499 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 ZNF282Q9UDV7 671 aaPredicted RBP2.25□□□□□ -2.05
CCDC38-208ENST00000549876 OARD1Q9Y530 152 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 TIMM10BQ9Y5J6 103 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 ALG6Q9Y672 507 aa2.25□□□□□ -2.05
CCDC38-208ENST00000549876 TTC41PQ6P2S7 1318 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 PPIAL4EA0A075B759 164 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 IGHV1OR15-1A0A075B7D0 117 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 IGHV7-81A0A0B4J1V7 117 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 GOLGA6L7A0A1B0GV03 622 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 A0A1B0GVL5 298 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 SERTM2A0A1B0GWG4 89 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 SAGE2PA6NJ88 616 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 F5H6K3 240 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 G3V4G9 280 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 CLDN9O95484 217 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 CA1P00915 261 aaPredicted RBP2.24□□□□□ -2.05
CCDC38-208ENST00000549876 IGHG4P01861 327 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 PABPC4LP0CB38 370 aaKnown RBP2.24□□□□□ -2.05
CCDC38-208ENST00000549876 PPIAL4FP0DN26 164 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 NCK1P16333 377 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 ADORA2BP29275 332 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 RPL13AP40429 203 aaKnown RBP2.24□□□□□ -2.05
CCDC38-208ENST00000549876 BTDP43251 543 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 GNPDA1P46926 289 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 DUSP3P51452 185 aaPredicted RBP2.24□□□□□ -2.05
CCDC38-208ENST00000549876 LIM2P55344 173 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 RND3P61587 244 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 OGDHQ02218 1023 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 PAX5Q02548 391 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 KLRC3Q07444 240 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 ZNF154Q13106 437 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 LAGE3Q14657 143 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 NDUFA9Q16795 377 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 TMEM52BQ4KMG9 183 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 TEX44Q53QW1 395 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 CAVIN4Q5BKX8 364 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 SPANXN2Q5MJ10 180 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 C1orf185Q5T7R7 199 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 LRRC66Q68CR7 880 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 PVRIGQ6DKI7 326 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 OR8G2PQ6IF36 304 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 OR2A2Q6IF42 318 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 KDM7AQ6ZMT4 941 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 H2BFWTQ7Z2G1 175 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 CEP112Q8N8E3 955 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 BBOF1Q8ND07 529 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 OR1L4Q8NGR5 311 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 KCNG3Q8TAE7 436 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 MCUR1Q96AQ8 359 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 EFHD2Q96C19 240 aaPredicted RBP2.24□□□□□ -2.05
CCDC38-208ENST00000549876 C10orf35Q96D05 121 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 SLC38A2Q96QD8 506 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 MTMR9Q96QG7 549 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 MBOAT4Q96T53 435 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 CHP1Q99653 195 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 NXF5Q9H1B4 397 aaKnown RBP2.24□□□□□ -2.05
CCDC38-208ENST00000549876 NEK6Q9HC98 313 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 NANSQ9NR45 359 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 SLC17A5Q9NRA2 495 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 SLC2A8Q9NY64 477 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 IL36GQ9NZH8 169 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 SCML2Q9UQR0 700 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 MEMO1Q9Y316 297 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 CDH10Q9Y6N8 788 aa2.24□□□□□ -2.05
CCDC38-208ENST00000549876 RPAP1Q9BWH6 1393 aaPredicted RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 MTCL1Q9Y4B5 1905 aaKnown RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 IGHV2-70DA0A0C4DH43 119 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 A0A1W2PPE3 182 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 PSMB11A5LHX3 300 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 BTBD17A6NE02 478 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 NCF1BA6NI72 391 aaPredicted RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 NCF1CA8MVU1 366 aaPredicted RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 DLGAP1O14490 977 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 ICOSLGO75144 302 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 NPIPB7O75200 414 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 UGT2B17O75795 530 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 IGHV4-34P06331 123 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 CD80P33681 288 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 CRYBB2P43320 205 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 SYKP43405 635 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 RPL29P47914 159 aaKnown RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 CRYBB1P53674 252 aaPredicted RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 RPL8P62917 257 aaKnown RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 TGM3Q08188 693 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 BST2Q10589 180 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms