RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SAMD14Q8IZD0 417 aaPredicted RBP10.18□□□□□ -0.78
LINC00661-204ENST00000549354 OR56A1Q8NGH5 318 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 THAP4Q8WY91 577 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 PTP4A1Q93096 173 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 NKD1Q969G9 470 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 GUCD1Q96NT3 240 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 NMNAT3Q96T66 252 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 SEC22CQ9BRL7 303 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 NRSN2Q9GZP1 204 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 TSPAN10Q9H1Z9 355 aaPredicted RBP10.18□□□□□ -0.78
LINC00661-204ENST00000549354 PIGUQ9H490 435 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 SIDT1Q9NXL6 827 aaKnown RBP10.18□□□□□ -0.78
LINC00661-204ENST00000549354 IL20Q9NYY1 176 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 OR10H1Q9Y4A9 318 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 SLC22A7Q9Y694 548 aa10.18□□□□□ -0.78
LINC00661-204ENST00000549354 A0A0G2JPF8 293 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 HNRNPCL3B7ZW38 293 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 EMC8O43402 210 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 FGF17O60258 216 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 GMDSO60547 372 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 HLA-DQA2P01906 255 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 MAS1P04201 325 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 RLN1P04808 185 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 HNRNPCL4P0DMR1 293 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 ERVK-25P63136 954 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 OR1Q1Q15612 314 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 PRAMEF17Q5VTA0 474 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 TIGD3Q6B0B8 471 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 MAMSTRQ6ZN01 415 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 NDUFAF7Q7L592 441 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 OR9A4Q8NGU2 314 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 RASD2Q96D21 266 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 DDOQ99489 341 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 NDC1Q9BTX1 674 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 FOLH1BQ9HBA9 442 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 MRPL39Q9NYK5 338 aaKnown RBP10.17□□□□□ -0.78
LINC00661-204ENST00000549354 DAPP1Q9UN19 280 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 RCE1Q9Y256 329 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 IER3IP1Q9Y5U9 82 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 LILRA5A6NI73 299 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 C11orf98E9PRG8 122 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 SELENOFO60613 162 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 SLC19A2O60779 497 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 CT62P0C5K7 136 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 VEGFCP49767 419 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 BLVRAP53004 296 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 TSPAN5P62079 268 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 CD300LDQ6UXZ3 194 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 ZPLD1Q8TCW7 415 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 DNASE2BQ8WZ79 361 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 BPIFA2Q96DR5 249 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 DHRS9Q9BPW9 319 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 KLK11Q9UBX7 282 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 ADAM11O75078 769 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 RAF1P04049 648 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 ALDOBP05062 364 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 H2AFB2P0C5Z0 115 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 ZNF10P21506 573 aaPredicted RBP10.17□□□□□ -0.78
LINC00661-204ENST00000549354 EDNRAP25101 427 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 NXPH1P58417 271 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 FXYD6P3P58550 94 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 C19orf57Q0VDD7 668 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 SLC36A2Q495M3 483 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 TMEM255AQ5JRV8 349 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 DGAT2L6Q6ZPD8 337 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 USP53Q70EK8 1073 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 GKN2Q86XP6 184 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 CDK20Q8IZL9 346 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 KDM8Q8N371 416 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 ZC3HAV1LQ96H79 300 aaKnown RBP10.17□□□□□ -0.78
LINC00661-204ENST00000549354 TEAD3Q99594 435 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 TIMP4Q99727 224 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 CHRNA10Q9GZZ6 450 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 GHITMQ9H3K2 345 aa10.17□□□□□ -0.78
LINC00661-204ENST00000549354 A0A0A6YYC8 382 aaPredicted RBP10.16□□□□□ -0.78
LINC00661-204ENST00000549354 I3L1I5 382 aaPredicted RBP10.16□□□□□ -0.78
LINC00661-204ENST00000549354 K7ESF4 209 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 GPR171O14626 319 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 B3GALT2O43825 422 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 HLA-DQB1P01920 261 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 FOSL2P15408 326 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 RAB3BP20337 219 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 HTR2AP28223 471 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 LRRC37A5PQ49AS3 106 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 EXOSC6Q5RKV6 272 aaKnown RBP10.16□□□□□ -0.78
LINC00661-204ENST00000549354 RNLSQ5VYX0 342 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 NIPAL3Q6P499 406 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 Q6ZTK2 550 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 MEPCEQ7L2J0 689 aaKnown RBP10.16□□□□□ -0.78
LINC00661-204ENST00000549354 GALNT11Q8NCW6 608 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 OR4K14Q8NGD5 310 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 THAP3Q8WTV1 239 aaPredicted RBP10.16□□□□□ -0.78
LINC00661-204ENST00000549354 TMEM239Q8WW34 195 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 ZNRF4Q8WWF5 429 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 RERGQ96A58 199 aaPredicted RBP10.16□□□□□ -0.78
LINC00661-204ENST00000549354 GAL3ST4Q96RP7 486 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 IER2Q9BTL4 223 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 MS4A7Q9GZW8 240 aaPredicted RBP10.16□□□□□ -0.78
LINC00661-204ENST00000549354 FBXL21Q9UKT6 434 aa10.16□□□□□ -0.78
LINC00661-204ENST00000549354 SATB2Q9UPW6 733 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms