RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 A0A1W2PPZ6 126 aa17.76■□□□□ 0.43
SSH1-207ENST00000547862 NR5A2O00482 541 aa17.76■□□□□ 0.43
SSH1-207ENST00000547862 CRISP3P54108 245 aa17.76■□□□□ 0.43
SSH1-207ENST00000547862 UBE2NP61088 152 aaKnown RBP17.76■□□□□ 0.43
SSH1-207ENST00000547862 LSM11P83369 360 aaKnown RBP eCLIP17.76■□□□□ 0.43
SSH1-207ENST00000547862 C1orf140Q5VVS0 124 aa17.76■□□□□ 0.43
SSH1-207ENST00000547862 SERPINA11Q86U17 422 aa17.76■□□□□ 0.43
SSH1-207ENST00000547862 SLC25A36Q96CQ1 311 aa17.76■□□□□ 0.43
SSH1-207ENST00000547862 SF3B5Q9BWJ5 86 aaKnown RBP17.76■□□□□ 0.43
SSH1-207ENST00000547862 TMEM45AQ9NWC5 275 aa17.76■□□□□ 0.43
SSH1-207ENST00000547862 DSPPQ9NZW4 1301 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 AHSA1O95433 338 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 GTF2E2P29084 291 aaKnown RBP17.75■□□□□ 0.43
SSH1-207ENST00000547862 ACAA2P42765 397 aaKnown RBP17.75■□□□□ 0.43
SSH1-207ENST00000547862 MAP2K6P52564 334 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 SRSF2Q01130 221 aaKnown RBP17.75■□□□□ 0.43
SSH1-207ENST00000547862 LRRC74AQ0VAA2 488 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 GSTA3Q16772 222 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 LINGO2Q7L985 606 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 CLIP4Q8N3C7 705 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 PROX1Q92786 737 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 TMEM19Q96HH6 336 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 SEC61A2Q9H9S3 476 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 CALML5Q9NZT1 146 aa17.75■□□□□ 0.43
SSH1-207ENST00000547862 TRPC5OSA6NMA1 111 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 A8MVM7 634 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 HDAC3O15379 428 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 LMX1BO60663 402 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 UPK3AO75631 287 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 IGFBP5P24593 272 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 HOXC5Q00444 222 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 LARS2Q15031 903 aaKnown RBP17.74■□□□□ 0.43
SSH1-207ENST00000547862 MST1LQ2TV78 715 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 IQCCQ4KMZ1 466 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 C6orf10Q5SRN2 563 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 CREB3L2Q70SY1 520 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 KDM8Q8N371 416 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 CA10Q9NS85 328 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 LPAR3Q9UBY5 353 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 KCNS2Q9ULS6 477 aa17.74■□□□□ 0.43
SSH1-207ENST00000547862 F12P00748 615 aaPredicted RBP17.73■□□□□ 0.43
SSH1-207ENST00000547862 CRYAAP02489 173 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 CECR9P0C854 216 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 APEHP13798 732 aaKnown RBP17.73■□□□□ 0.43
SSH1-207ENST00000547862 RPS5P46782 204 aaKnown RBP17.73■□□□□ 0.43
SSH1-207ENST00000547862 GZMKP49863 264 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 P2RY4P51582 365 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 MVDP53602 400 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 CLDN17P56750 224 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 IL1RL1Q01638 556 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 SWI5Q1ZZU3 235 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 PDCD4Q53EL6 469 aaKnown RBP17.73■□□□□ 0.43
SSH1-207ENST00000547862 RNF220Q5VTB9 566 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 GLB1L3Q8NCI6 653 aaPredicted RBP17.73■□□□□ 0.43
SSH1-207ENST00000547862 OR9I1Q8NGQ6 314 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 SLC38A5Q8WUX1 472 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 VPS33AQ96AX1 596 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 TPT1P8Q9HAU6 139 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 SEC14L4Q9UDX3 406 aa17.73■□□□□ 0.43
SSH1-207ENST00000547862 LOC100289279A0A1B0GTE1 492 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 SLC35F4A4IF30 521 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 TMEM247A6NEH6 219 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 SLC22A3O75751 556 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 PNMTP11086 282 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 IDO1P14902 403 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 SERPINF1P36955 418 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 NR4A2P43354 598 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 ROR2Q01974 943 aaKnown RBP17.72■□□□□ 0.43
SSH1-207ENST00000547862 NAAAQ02083 359 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 SLC9B1Q4ZJI4 515 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 FAM166AQ6J272 317 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 EPHX4Q8IUS5 362 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 KATNB1Q9BVA0 655 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 PARD6BQ9BYG5 372 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 OBP2BQ9NPH6 170 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 RASD1Q9Y272 281 aa17.72■□□□□ 0.43
SSH1-207ENST00000547862 IGHV4-61A0A0C4DH41 118 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 TMEM120BA0PK00 339 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 TMEM229AB2RXF0 380 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 SEC14L2O76054 403 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 IL6P05231 212 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 CELA3BP08861 270 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 TFPTP0C1Z6 253 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 OR4A8P0C604 315 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 SRD5A1P18405 259 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 CALCRP30988 508 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 IDH3GP51553 393 aaPredicted RBP17.71■□□□□ 0.43
SSH1-207ENST00000547862 WDR4P57081 412 aaKnown RBP17.71■□□□□ 0.43
SSH1-207ENST00000547862 NPRL3Q12980 569 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 KRTAP24-1Q3LI83 254 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 ZNF311Q5JNZ3 666 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 MYPOPQ86VE0 399 aaPredicted RBP17.71■□□□□ 0.43
SSH1-207ENST00000547862 BCL2L2Q92843 193 aaPredicted RBP17.71■□□□□ 0.43
SSH1-207ENST00000547862 ITCHQ96J02 903 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 FOXN4Q96NZ1 517 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 PRR14Q9BWN1 585 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 SPATA9Q9BWV2 254 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 NELFAQ9H3P2 528 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 RMND5AQ9H871 391 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 THAP1Q9NVV9 213 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms