RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 INIPQ9NRY2 104 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 CHCHD2Q9Y6H1 151 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-215ENST00000547672 A0A1W2PRG6 482 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 TMEM72A0PK05 275 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 A6NIZ1 184 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 MCIDASD6RGH6 385 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 AKAP8O43823 692 aaKnown RBP12.18□□□□□ -0.46
PTCH1-215ENST00000547672 CBR3O75828 277 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 DXOO77932 396 aaKnown RBP12.18□□□□□ -0.46
PTCH1-215ENST00000547672 OR2T7P0C7T2 308 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 FTH1P19P0C7X4 201 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 CEACAM1P13688 526 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 TGM1P22735 817 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 IDUAP35475 653 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 AQP2P41181 271 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 DSCR4P56555 118 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-215ENST00000547672 TAS2R43P59537 309 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 RAP1BP61224 184 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 RAP1AP62834 184 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 AIMP2Q13155 320 aaKnown RBP12.18□□□□□ -0.46
PTCH1-215ENST00000547672 CRMP1Q14194 572 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 TOMM34Q15785 309 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-215ENST00000547672 CTF1Q16619 201 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 POMZP3Q6PJE2 187 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 IGF2-ASQ6U949 168 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 USP43Q70EL4 1123 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 H1FNTQ75WM6 255 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-215ENST00000547672 HDDC2Q7Z4H3 204 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 BCDIN3DQ7Z5W3 292 aaKnown RBP12.18□□□□□ -0.46
PTCH1-215ENST00000547672 IL22RA1Q8N6P7 574 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 AMER2Q8N7J2 671 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 DEFB124Q8NES8 71 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 PRSS33Q8NF86 280 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 OR1J4Q8NGS1 313 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 OR2T4Q8NH00 348 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 OR2T27Q8NH04 317 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 UFD1Q92890 307 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 ZHX1-C8orf76Q96EF9 292 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 C1GALT1C1Q96EU7 318 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 TMEM41AQ96HV5 264 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 ENKD1Q9H0I2 346 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 OR51V1Q9H2C8 321 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 SSR3Q9UNL2 185 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 B3GALT5Q9Y2C3 310 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 LSM2Q9Y333 95 aaKnown RBP12.18□□□□□ -0.46
PTCH1-215ENST00000547672 NOX1Q9Y5S8 564 aa12.18□□□□□ -0.46
PTCH1-215ENST00000547672 NPIPB13A6NJU9 1138 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 GJE1A6NN92 205 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 CENPBD1B2RD01 187 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 NPIPB4C9JG80 1138 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 M0R082 166 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 RNF13O43567 381 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 GMFGO60234 142 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 ZNF354AO60765 605 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-215ENST00000547672 ATE1O95260 518 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 SLC2A10O95528 541 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 TFPIP10646 304 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 HIST1H1CP16403 213 aaKnown RBP12.17□□□□□ -0.46
PTCH1-215ENST00000547672 CPEP16870 476 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 CD53P19397 219 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 GALP22466 123 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 LIPAP38571 399 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 PTGDSP41222 190 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 CYB561P49447 251 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 DIO1P49895 249 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 ETV1P50549 477 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 ERVK-25P63136 954 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 RPL18Q07020 188 aaKnown RBP12.17□□□□□ -0.46
PTCH1-215ENST00000547672 TPBGQ13641 420 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 GALEQ14376 348 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 GGTLC2Q14390 218 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 TRAM1Q15629 374 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 PLPPR5Q32ZL2 321 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 ACER2Q5QJU3 275 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 ZNF362Q5T0B9 420 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-215ENST00000547672 ABHD17BQ5VST6 288 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 C3orf33Q6P1S2 294 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 SLC16A12Q6ZSM3 486 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 LRRC75AQ8NAA5 344 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 OR4K13Q8NH42 304 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 SLC25A36Q96CQ1 311 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 NXPE2Q96DL1 559 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 MOGAT1Q96PD6 335 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 MESP1Q9BRJ9 268 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 LRFN3Q9BTN0 628 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 GALNT9Q9HCQ5 603 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 ERVK13-1Q9NX77 482 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 FOXJ2Q9P0K8 574 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 TRAPPC4Q9Y296 219 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 GSTK1Q9Y2Q3 226 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 MRPS18CQ9Y3D5 142 aaKnown RBP12.17□□□□□ -0.46
PTCH1-215ENST00000547672 HDGFL3Q9Y3E1 203 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 EXPH5Q8NEV8 1989 aa12.17□□□□□ -0.46
PTCH1-215ENST00000547672 FAM183AA6NL82 134 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 PLPP3O14495 311 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 ADAM10O14672 748 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 TERTO14746 1132 aaKnown RBP12.16□□□□□ -0.46
PTCH1-215ENST00000547672 SLC30A4O14863 429 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 SNPHO15079 494 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms