RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 DPP10Q8N608 796 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 ELOA3Q8NG57 546 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 DNAJA4Q8WW22 397 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 ZNF385DQ9H6B1 395 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 EVA1AQ9H8M9 152 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 NDUFAF1Q9Y375 327 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 NAV3Q8IVL0 2385 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 TRIM64A6NGJ6 449 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 TRIM64BA6NI03 449 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 OR2T1O43869 369 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 TPST1O60507 370 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 SERPINB7O75635 380 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 HEXAP06865 529 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 PNMTP11086 282 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 CD40P25942 277 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 ZNF83P51522 516 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 LTBQ06643 244 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 FAM91A1Q658Y4 838 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 DTX2Q86UW9 622 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 WDR31Q8NA23 367 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 HIPK4Q8NE63 616 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 GTPBP3Q969Y2 492 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 CPPED1Q9BRF8 314 aaPredicted RBP16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 PTDSS2Q9BVG9 487 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 SLC17A5Q9NRA2 495 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 AMDHD2Q9Y303 409 aa16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 MAGED1Q9Y5V3 778 aaPredicted RBP16.37■□□□□ 0.21
CHMP1A-203ENST00000547614 A0A1B0GWA3 101 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 RPS5P46782 204 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 CDH11P55287 796 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 RBBP4Q09028 425 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 FAM69AQ5T7M9 428 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 C9orf135Q5VTT2 229 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 ULK3Q6PHR2 472 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 NET1Q7Z628 596 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 DEPDC4Q8N2C3 294 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 SLC38A4Q969I6 547 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 SLC25A36Q96CQ1 311 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 KTI12Q96EK9 354 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 THOC1Q96FV9 657 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 ANKRD27Q96NW4 1050 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 TRAF4Q9BUZ4 470 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 ALG2Q9H553 416 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 NPHS2Q9NP85 383 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 TESQ9UGI8 421 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 PLCE1Q9P212 2302 aa16.36■□□□□ 0.21
CHMP1A-203ENST00000547614 A0A1W2PR80 420 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 ANGPT2O15123 496 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 KRT33AO76009 404 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 LY6G6DO95868 133 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 CD8AP01732 235 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 PAX7P23759 505 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 HTR2AP28223 471 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 GTF2E2P29084 291 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 PRPS1P60891 318 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 GLIPR1L2Q4G1C9 344 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 ALG10BQ5I7T1 473 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 AGAP6Q5VW22 663 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 SLC22A25Q6T423 547 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 DHDDSQ86SQ9 333 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 COMTD1Q86VU5 262 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 ARMC8Q8IUR7 673 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 EPHX4Q8IUS5 362 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 C11orf65Q8NCR3 313 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 SLC47A1Q96FL8 570 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 CGREF1Q99674 301 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 OBP2BQ9NPH6 170 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 SLC13A4Q9UKG4 626 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 ANGPT4Q9Y264 503 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 B3GALT5Q9Y2C3 310 aa16.35■□□□□ 0.21
CHMP1A-203ENST00000547614 NSD1Q96L73 2696 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 A0A0G2JND7 137 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 LOC102725191A0A1B0GVB3 256 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 SASH3O75995 380 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 MFN2O95140 757 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 WNT11O96014 354 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 ZNF43P17038 809 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 PCBP3P57721 371 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 RGS8P57771 180 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 NCALDP61601 193 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 RETREG3Q86VR2 466 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 PTOV1Q86YD1 416 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 OR6S1Q8NH40 331 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 TAAR8Q969N4 342 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 OXGR1Q96P68 337 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 ZNF317Q96PQ6 595 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 DHRS9Q9BPW9 319 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 LINC00470Q9BZP3 86 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 TMEM27Q9HBJ8 222 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 SELENONQ9NZV5 590 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 POU2F3Q9UKI9 436 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 RCE1Q9Y256 329 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 CSPG4Q6UVK1 2322 aa16.34■□□□□ 0.21
CHMP1A-203ENST00000547614 HEATR1Q9H583 2144 aaKnown RBP16.33■□□□□ 0.21
CHMP1A-203ENST00000547614 TRAV36DV7A0A075B6V5 113 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 A0A087WUJ7 227 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 E7EQL1 145 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 ZNF587BE7ETH6 402 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 M0R1B8 84 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms