RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CTSBP07858 339 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 FAM157BP0CG42 384 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 RAB28P51157 221 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 GNA13Q14344 377 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 IQCF2Q8IXL9 164 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 LRRC25Q8N386 305 aaPredicted RBP13.48□□□□□ -0.25
HOXC11-202ENST00000546378 CHST4Q8NCG5 386 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 OR51S1Q8NGJ8 323 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 STK35Q8TDR2 534 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 PELI1Q96FA3 418 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 IRGMA1A4Y4 181 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 EEF1E1-BLOC1S5C9J1V9 151 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 NFYAP23511 347 aaPredicted RBP13.47□□□□□ -0.25
HOXC11-202ENST00000546378 RBMS1P29558 406 aaKnown RBP13.47□□□□□ -0.25
HOXC11-202ENST00000546378 AKR1C3P42330 323 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 CCR9P51686 369 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 FXYD6P3P58550 94 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 PPP1CAP62136 330 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 ZNF85Q03923 595 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 SLITRK4Q8IW52 837 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 OR4K14Q8NGD5 310 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 KCNJ15Q99712 375 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 IL20Q9NYY1 176 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 PRR13Q9NZ81 148 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 GPR160Q9UJ42 338 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 MOKQ9UQ07 419 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 ALPK3Q96L96 1907 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 FITM1A5D6W6 292 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 TRAPPC13A5PLN9 417 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 SPINT1O43278 529 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 LILRB5O75023 590 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 KRT33AO76009 404 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 CCKBRP32239 447 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 MTNR1BP49286 362 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 EMDP50402 254 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 OR7A5Q15622 319 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 RNF165Q6ZSG1 346 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 RHOUQ7L0Q8 258 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 RTL10Q7L3V2 364 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 GALNTL5Q7Z4T8 443 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 PRSS42Q7Z5A4 293 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 TDHQ8IZJ6 230 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 KRCC1Q9NPI7 259 aaPredicted RBP13.47□□□□□ -0.25
HOXC11-202ENST00000546378 MEPEQ9NQ76 525 aaPredicted RBP13.47□□□□□ -0.25
HOXC11-202ENST00000546378 DZANK1Q9NVP4 752 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 A0A1W2PPV9 198 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 ADAM11O75078 769 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 RP2O75695 350 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 FPR3P25089 353 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 FOXL2P58012 376 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 TFF2Q03403 129 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 DCST2Q5T1A1 773 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 GLB1L2Q8IW92 636 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 SGTBQ96EQ0 304 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 SCMH1Q96GD3 660 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 GAL3ST4Q96RP7 486 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 SDF2Q99470 211 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 HEXA-AS1Q9H8Q6 139 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 SCP2D1Q9UJQ7 156 aa13.47□□□□□ -0.25
HOXC11-202ENST00000546378 A0A1B0GWA3 101 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 SLC35G6P0C7Q6 338 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 AQP2P41181 271 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 SKP1P63208 163 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 SIRPAP78324 504 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 C19orf57Q0VDD7 668 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 IRF4Q15306 451 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 GPR139Q6DWJ6 353 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 SLC48A1Q6P1K1 146 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 SEZ6L2Q6UXD5 910 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 DEFB119Q8N690 84 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 OR11G2Q8NGC1 345 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 SETD7Q8WTS6 366 aaKnown RBP13.46□□□□□ -0.25
HOXC11-202ENST00000546378 S100A16Q96FQ6 103 aaKnown RBP13.46□□□□□ -0.25
HOXC11-202ENST00000546378 OR2M2Q96R28 347 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 MFFQ9GZY8 342 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 PRDM7Q9NQW5 492 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 NUP50Q9UKX7 468 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 A0A0A6YYC8 382 aaPredicted RBP13.46□□□□□ -0.25
HOXC11-202ENST00000546378 POM121BA6NF01 834 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 SLC22A31A6NKX4 558 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 I3L1I5 382 aaPredicted RBP13.46□□□□□ -0.25
HOXC11-202ENST00000546378 RCBTB2O95199 551 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 SRMP19623 302 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 THBS2P35442 1172 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 HNRNPA1L2Q32P51 320 aaKnown RBP13.46□□□□□ -0.25
HOXC11-202ENST00000546378 TIGD3Q6B0B8 471 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 DPY19L4Q7Z388 723 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 SLC35F2Q8IXU6 374 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 JAGN1Q8N5M9 183 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 OR2L3Q8NG85 312 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 ADAMTS14Q8WXS8 1223 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 NT5DC2Q9H857 520 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 KCNE5Q9UJ90 142 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 ICKQ9UPZ9 632 aa13.46□□□□□ -0.25
HOXC11-202ENST00000546378 A0A0A6YYD5 115 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 A0A1W2PQU0 124 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 hCG_1807616A0A1W2PRN6 198 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 FAM74A7A6NL05 159 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 P2RX6O15547 441 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 FGF17O60258 216 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms