RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 AKAP9Q99996 3911 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 KIF26AQ9ULI4 1882 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-224ENST00000545688 SPENQ96T58 3664 aaKnown RBP2.6□□□□□ -1.99
SNHG1-224ENST00000545688 TMEM150BA6NC51 233 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 SAGE2PA6NJ88 616 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 DDX39AO00148 427 aaKnown RBP2.6□□□□□ -1.99
SNHG1-224ENST00000545688 TM9SF1O15321 606 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 PLEKHA8P1O95397 391 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 JCHAINP01591 159 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 IGHV3-48P01763 117 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 IGLL1P15814 213 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 CCNA2P20248 432 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 MX1P20591 662 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 NUDT1P36639 197 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 STARP49675 285 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 CASP9P55211 416 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 DMC1Q14565 340 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 SLMAPQ14BN4 828 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 PTGES3Q15185 160 aaKnown RBP2.6□□□□□ -1.99
SNHG1-224ENST00000545688 ACSF3Q4G176 576 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-224ENST00000545688 SLC39A12Q504Y0 691 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 XKR4Q5GH76 650 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 LIPKQ5VXJ0 399 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 SLX4IPQ5VYV7 408 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 TPGS2Q68CL5 300 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 PLA2G4DQ86XP0 818 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 BLOC1S5Q8TDH9 187 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 C5orf30Q96GV9 206 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 MBOAT4Q96T53 435 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 RIT2Q99578 217 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 TXN2Q99757 166 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 NFKBIZQ9BYH8 718 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 NECAP2Q9NVZ3 263 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 NDUFA13Q9P0J0 144 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 ANKMY1Q9P2S6 941 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 COL5A1P20908 1838 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-224ENST00000545688 VWA8A3KMH1 1905 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 MYH6P13533 1939 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 MTORP42345 2549 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 PTPRBP23467 1997 aa2.6□□□□□ -1.99
SNHG1-224ENST00000545688 TNRC6BQ9UPQ9 1833 aaKnown RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 ESYT2A0FGR8 921 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 K7EQS6 105 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 IMPA2O14732 288 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 MSH4O15457 936 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 IGHV4-34P06331 123 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 ZNF18P17022 549 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 ARF4P18085 180 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 SFNP31947 248 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 KIF5BP33176 963 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 RPL29P47914 159 aaKnown RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 DHPSP49366 369 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 CNN1P51911 297 aaKnown RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 LIM2P55344 173 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 PAX5Q02548 391 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 PLOD1Q02809 727 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 LAMTOR4Q0VGL1 99 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 MAPK6Q16659 721 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 LEG1Q6P5S2 330 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 ALKAL1Q6UXT8 129 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 TMEM150AQ86TG1 271 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 C17orf82Q86X59 251 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 HDDC3Q8N4P3 179 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 OR2AP1Q8NGE2 309 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 TADA1Q96BN2 335 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 JAKMIP1Q96N16 626 aaKnown RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 MMADHCQ9H3L0 296 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 XPNPEP1Q9NQW7 623 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 WRAP73Q9P2S5 460 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 ZNF282Q9UDV7 671 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 SMC3Q9UQE7 1217 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 PTPRDP23468 1912 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 SETD2Q9BYW2 2564 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-224ENST00000545688 ICE1Q9Y2F5 2266 aa2.59□□□□□ -1.99
SNHG1-224ENST00000545688 ADGRG4Q8IZF6 3080 aa2.59□□□□□ -2
SNHG1-224ENST00000545688 LRBAP50851 2863 aa2.59□□□□□ -2
SNHG1-224ENST00000545688 OTOGQ6ZRI0 2925 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 NAV3Q8IVL0 2385 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 FBN3Q75N90 2809 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 HIVEP2P31629 2446 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 IGHV1OR15-1A0A075B7D0 117 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 FAM166BA8MTA8 275 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 B4GALT5O43286 388 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 PPIHO43447 177 aaKnown RBP2.58□□□□□ -2
SNHG1-224ENST00000545688 ICOSLGO75144 302 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 NPIPB7O75200 414 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 ARL2P36404 184 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 OPRD1P41143 372 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 KIAA1024LP59773 190 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 MRPS11P82912 194 aaKnown RBP2.58□□□□□ -2
SNHG1-224ENST00000545688 GFPT1Q06210 699 aaPredicted RBP2.58□□□□□ -2
SNHG1-224ENST00000545688 TWF1Q12792 350 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 ZP4Q12836 540 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 ZNF154Q13106 437 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 NME3Q13232 169 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 UBE2V2Q15819 145 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 IMMTQ16891 758 aaKnown RBP2.58□□□□□ -2
SNHG1-224ENST00000545688 ZFP2Q6ZN57 461 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 LPCAT2Q7L5N7 544 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 RABEPKQ7Z6M1 372 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms