RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 KRTCAP2Q8N6L1 136 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 CNOT9Q92600 299 aaKnown RBP12.66□□□□□ -0.38
RTN3-214ENST00000545432 MRPL24Q96A35 216 aaKnown RBP12.66□□□□□ -0.38
RTN3-214ENST00000545432 DUSP26Q9BV47 211 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 GATA5Q9BWX5 397 aaPredicted RBP12.66□□□□□ -0.38
RTN3-214ENST00000545432 TMPRSS13Q9BYE2 586 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 OR51I1Q9H343 314 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 DYNLRB1Q9NP97 96 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 REV1Q9UBZ9 1251 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 CMAHPQ9Y471 501 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 ZNF503-AS2A6NEH8 195 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 AP3D1O14617 1153 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 PIP5K1BO14986 540 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 FZD7O75084 574 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 NPIPB7O75200 414 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 RP2O75695 350 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 RGS9O75916 674 aaPredicted RBP12.65□□□□□ -0.38
RTN3-214ENST00000545432 ZNF432O94892 652 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 FSHBP01225 129 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 GSNP06396 782 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 OR12D1P0DN82 309 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 SAGP10523 405 aaPredicted RBP12.65□□□□□ -0.38
RTN3-214ENST00000545432 UBA52P62987 128 aaKnown RBP12.65□□□□□ -0.38
RTN3-214ENST00000545432 CEACAM7Q14002 265 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 GSTA3Q16772 222 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 FAM153CQ494X1 144 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 FAHD2BQ6P2I3 314 aaPredicted RBP12.65□□□□□ -0.38
RTN3-214ENST00000545432 SHQ1Q6PI26 577 aaKnown RBP12.65□□□□□ -0.38
RTN3-214ENST00000545432 TRMT10CQ7L0Y3 403 aaKnown RBP12.65□□□□□ -0.38
RTN3-214ENST00000545432 C16orf62Q7Z3J2 963 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 CCDC36Q8IYA8 594 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 TWIST2Q8WVJ9 160 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 YIPF5Q969M3 257 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 ROPN1LQ96C74 230 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 FAHD2AQ96GK7 314 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 ZNF75AQ96N20 296 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 MRPL37Q9BZE1 423 aaKnown RBP12.65□□□□□ -0.38
RTN3-214ENST00000545432 NOX3Q9HBY0 568 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 SLC52A3Q9NQ40 469 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 B3GNT2Q9NY97 397 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 TREM2Q9NZC2 230 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 PSMC3IPQ9P2W1 217 aaPredicted RBP12.65□□□□□ -0.38
RTN3-214ENST00000545432 GIMAP2Q9UG22 337 aa12.65□□□□□ -0.38
RTN3-214ENST00000545432 LOC105371242A0A075B767 164 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 A0A096LPE4 126 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 A0A1W2PPZ6 126 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 AGAP5A6NIR3 686 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 RNASET2O00584 256 aaKnown RBP12.64□□□□□ -0.39
RTN3-214ENST00000545432 RIPK2O43353 540 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 ZNF35P13682 527 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 ANPEPP15144 967 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 CCT5P48643 541 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 CLDN8P56748 225 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 MYBPC1Q00872 1141 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 EPS8Q12929 822 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 DAG1Q14118 895 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 IL23RQ5VWK5 629 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 REP15Q6BDI9 236 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 TMEM225Q6GV28 225 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 TREML4Q6UXN2 200 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 THSD4Q6ZMP0 1018 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 LSRQ86X29 649 aaPredicted RBP12.64□□□□□ -0.39
RTN3-214ENST00000545432 CLEC4FQ8N1N0 589 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 XAGE5Q8WWM1 108 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 IFT81Q8WYA0 676 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 SLC35G5Q96KT7 338 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 ALKBH3Q96Q83 286 aaPredicted RBP12.64□□□□□ -0.39
RTN3-214ENST00000545432 TPK1Q9H3S4 243 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 LPAR2Q9HBW0 351 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 ZNF275Q9NSD4 429 aaPredicted RBP12.64□□□□□ -0.39
RTN3-214ENST00000545432 RASD1Q9Y272 281 aa12.64□□□□□ -0.39
RTN3-214ENST00000545432 WNK2Q9Y3S1 2297 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 RNF103-CHMP3A0A140T963 221 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 TMEM233B4DJY2 109 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 J3QLI3 93 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 M0R233 179 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 CFLARO15519 480 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 PEX11AO75192 247 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 DEAF1O75398 565 aaPredicted RBP12.63□□□□□ -0.39
RTN3-214ENST00000545432 KRT33AO76009 404 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 RPS4Y1P22090 263 aaKnown RBP12.63□□□□□ -0.39
RTN3-214ENST00000545432 GLRXP35754 106 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 ARF1P84077 181 aaKnown RBP12.63□□□□□ -0.39
RTN3-214ENST00000545432 ROR2Q01974 943 aaKnown RBP12.63□□□□□ -0.39
RTN3-214ENST00000545432 CKAP4Q07065 602 aaKnown RBP12.63□□□□□ -0.39
RTN3-214ENST00000545432 SNTB2Q13425 540 aaKnown RBP12.63□□□□□ -0.39
RTN3-214ENST00000545432 OR7A5Q15622 319 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 FXNQ16595 210 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 ATAD3BQ5T9A4 648 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 SAXO2Q658L1 398 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 ACSM5Q6NUN0 579 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 C10orf107Q8IVU9 208 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 CLECL1Q8IZS7 167 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 OR8J2Q8NGG1 315 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 DVL3Q92997 716 aaPredicted RBP12.63□□□□□ -0.39
RTN3-214ENST00000545432 C3orf30Q96M34 536 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 TXLNGYQ9BZA5 131 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 ZNF385DQ9H6B1 395 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 ARMCX1Q9P291 453 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 RCE1Q9Y256 329 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms