RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ZBED5Q49AG3 693 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 OGFRL1Q5TC84 451 aaPredicted RBP10.67□□□□□ -0.7
DDB1-223ENST00000543658 TMEM225Q6GV28 225 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 ZNF770Q6IQ21 691 aaPredicted RBP10.67□□□□□ -0.7
DDB1-223ENST00000543658 ZNF585AQ6P3V2 769 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 PAQR6Q6TCH4 344 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 SLC46A3Q7Z3Q1 461 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 ZER1Q7Z7L7 766 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 MEX3DQ86XN8 651 aaKnown RBP10.67□□□□□ -0.7
DDB1-223ENST00000543658 MCEMP1Q8IX19 187 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 PACRGLQ8N7B6 248 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 SCAIQ8N9R8 606 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 OR5M9Q8NGP3 310 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 OR13C2Q8NGS9 318 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 ZNF417Q8TAU3 575 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 TEX47Q8TBZ9 253 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 MOGAT1Q96PD6 335 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 ZNF587Q96SQ5 575 aaPredicted RBP10.67□□□□□ -0.7
DDB1-223ENST00000543658 NIPSNAP1Q9BPW8 284 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 SMURF2Q9HAU4 748 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 TBC1D23Q9NUY8 699 aa10.67□□□□□ -0.7
DDB1-223ENST00000543658 MAGED1Q9Y5V3 778 aaPredicted RBP10.67□□□□□ -0.7
DDB1-223ENST00000543658 ATMQ13315 3056 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 SHANK1Q9Y566 2161 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 TRAV27A0A087WT01 109 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 AHRRA9YTQ3 701 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 C11orf98E9PRG8 122 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 H0YC42 278 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 SOCS2O14508 198 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 RNF13O43567 381 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 WDR1O75083 606 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 PTGER4P35408 488 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 RPL4P36578 427 aaKnown RBP10.66□□□□□ -0.7
DDB1-223ENST00000543658 TPD52P55327 224 aaPredicted RBP10.66□□□□□ -0.7
DDB1-223ENST00000543658 PUDPQ08623 228 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 C19orf57Q0VDD7 668 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 PON3Q15166 354 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 ZNF239Q16600 458 aaKnown RBP10.66□□□□□ -0.7
DDB1-223ENST00000543658 GTF2IRD2BQ6EKJ0 949 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 FAHD1Q6P587 224 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 RASSF6Q6ZTQ3 369 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 H1FNTQ75WM6 255 aaPredicted RBP10.66□□□□□ -0.7
DDB1-223ENST00000543658 FCRLAQ7L513 359 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 GALNT5Q7Z7M9 940 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 GTF2IRD2Q86UP8 949 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 CD163Q86VB7 1156 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 GALNT4Q8N4A0 578 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 ST6GALNAC3Q8NDV1 305 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 ADPRHL1Q8NDY3 354 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 OR51A7Q8NH64 312 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 FAM57AQ8TBR7 257 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 LIPHQ8WWY8 451 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 ADGRG7Q96K78 797 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 TRIB1Q96RU8 372 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 TEX12Q9BXU0 123 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 SRXN1Q9BYN0 137 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 PNPLA3Q9NST1 481 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 MRPL39Q9NYK5 338 aaKnown RBP10.66□□□□□ -0.7
DDB1-223ENST00000543658 USE1Q9NZ43 259 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 B3GALT5Q9Y2C3 310 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 CDH10Q9Y6N8 788 aa10.66□□□□□ -0.7
DDB1-223ENST00000543658 PHF3Q92576 2039 aaKnown RBP10.66□□□□□ -0.7
DDB1-223ENST00000543658 IGHV3-15A0A0B4J1V0 119 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 SLC22A20A6NK97 555 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 AQP7P3A6NL99 342 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 CLCA1A8K7I4 914 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 FTCDNL1E5RQL4 147 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 CDC42EP2O14613 210 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 AKAP8O43823 692 aaKnown RBP10.65□□□□□ -0.7
DDB1-223ENST00000543658 SERPINI2O75830 405 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 NDUFB2O95178 105 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 VAMP5O95183 116 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 SOX14O95416 240 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 PLGP00747 810 aaPredicted RBP10.65□□□□□ -0.7
DDB1-223ENST00000543658 ASAH2BP0C7U1 165 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 OSMP13725 252 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 POU1F1P28069 291 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 SLC6A6P31641 620 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 VHLP40337 213 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 PTDSS1P48651 473 aaKnown RBP10.65□□□□□ -0.7
DDB1-223ENST00000543658 DAPP51397 102 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 PPP2R2BQ00005 443 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 LTBQ06643 244 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 C1DQ13901 141 aaKnown RBP10.65□□□□□ -0.7
DDB1-223ENST00000543658 GXYLT1Q4G148 440 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 ALG10Q5BKT4 473 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 KDM4DQ6B0I6 523 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 SMARCD3Q6STE5 483 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 KLHL17Q6TDP4 642 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 CD300LDQ6UXZ3 194 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 ZNF620Q6ZNG0 422 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 GPAT4Q86UL3 456 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 LSRQ86X29 649 aaPredicted RBP10.65□□□□□ -0.7
DDB1-223ENST00000543658 SLC43A2Q8N370 569 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 LRRC17Q8N6Y2 441 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 TMEM99Q8N816 258 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 ZPLD1Q8TCW7 415 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 ZNF845Q96IR2 970 aaPredicted RBP10.65□□□□□ -0.7
DDB1-223ENST00000543658 DOCK7Q96N67 2140 aa10.65□□□□□ -0.7
DDB1-223ENST00000543658 TUBA1CQ9BQE3 449 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms