RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 RNF151Q2KHN1 245 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 VWA2Q5GFL6 755 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 HBMQ6B0K9 141 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 SSX9Q7RTT3 188 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TECPR1Q7Z6L1 1165 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 NLRP8Q86W28 1048 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 PAPD5Q8NDF8 572 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 OR1N1Q8NGS0 311 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 PLA2G2FQ9BZM2 168 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 GORASP2Q9H8Y8 452 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC6A20Q9NP91 592 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 CMAHPQ9Y471 501 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 CORINQ9Y5Q5 1042 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 LRIT2A6NDA9 550 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 OR2AT4A6NND4 320 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 H0Y8G0 127 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 RGS9O75916 674 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 LGI1O95970 557 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 B3GALT4O96024 378 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 ITGB2P05107 769 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 F13BP05160 661 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 HTR5AP47898 357 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 RGS6P49758 472 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 PLGLAQ15195 96 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM236Q5W0B7 351 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 C22orf42Q6IC83 251 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 FAM83HQ6ZRV2 1179 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 DTWD2Q8NBA8 298 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 OR1J2Q8NGS2 313 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 GPR148Q8TDV2 347 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 DMRTA2Q96SC8 542 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 HINT2Q9BX68 163 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 VN1R3Q9BXE9 311 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 GLIPR2Q9H4G4 154 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 MED11Q9P086 117 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 GSKIPQ9P0R6 139 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 COPZ2Q9P299 210 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 HRH3Q9Y5N1 445 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TMED7-TICAM2A0A0A6YYA0 188 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 KDM4EB2RXH2 506 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC33A1O00400 549 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 MPPED1O15442 326 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 LRRTM2O43300 516 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 NME1P15531 152 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TRHRP34981 398 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 MAGEA12P43365 314 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 AP2S1P53680 142 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 RPL19P84098 196 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM244Q5VVB8 128 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 EIF5AL1Q6IS14 154 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 GAB3Q8WWW8 586 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 SARAFQ96BY9 339 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 MYEOVQ96EZ4 313 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 NECAB3Q96P71 396 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 LRRC61Q9BV99 259 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 ALG8Q9BVK2 526 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TMED7Q9Y3B3 224 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 MTCH2Q9Y6C9 303 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 UBR3Q6ZT12 1888 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 LAMB1P07942 1786 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 PIGBOS1A0A0B4J2F0 54 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 LILRA5A6NI73 299 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 IFNGR1P15260 489 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TGM4P49221 684 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 EPHA5P54756 1037 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 CNN3Q15417 329 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC36A2Q495M3 483 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TP53I3Q53FA7 332 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 C6orf89Q6UWU4 347 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TRIM46Q7Z4K8 759 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 MEX3DQ86XN8 651 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 RAB39BQ96DA2 213 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 MS4A6EQ96DS6 147 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 MICU1Q9BPX6 476 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TEX101Q9BY14 249 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF700Q9H0M5 742 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 NXF5Q9H1B4 397 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 ACOT13Q9NPJ3 140 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 GPR83Q9NYM4 423 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 ABCG2Q9UNQ0 655 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 NPFFR2Q9Y5X5 522 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC22A7Q9Y694 548 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 USP54Q70EL1 1684 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 CXorf51AA0A1B0GTR3 108 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF587BE7ETH6 402 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 H0YIG0 161 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 M0R129 80 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 PLPP1O14494 284 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 DSCR3O14972 297 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 NUDT21O43809 227 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 RAD1O60671 282 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 FCGR2AP12318 317 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 MAP2K4P45985 399 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 CDNFQ49AH0 187 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 PODNL1Q6PEZ8 512 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 CBLL1Q75N03 491 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 BATF2Q8N1L9 274 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF709Q8N972 641 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 POGLUT1Q8NBL1 392 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 OR11L1Q8NGX0 322 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms