RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 FASP25445 335 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 CTSSP25774 331 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 DNAJA1P31689 397 aaKnown RBP10.88□□□□□ -0.67
DDX55-210ENST00000543016 OPRM1P35372 400 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 LIMS1P48059 325 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 UGT2B15P54855 530 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 KPNB1Q14974 876 aaKnown RBP10.88□□□□□ -0.67
DDX55-210ENST00000543016 POU4F3Q15319 338 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 OTUD3Q5T2D3 398 aaPredicted RBP10.88□□□□□ -0.67
DDX55-210ENST00000543016 TMEM225Q6GV28 225 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 ABLIM2Q6H8Q1 611 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 XKRXQ6PP77 449 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 SEM1Q6ZVN7 128 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 TMPRSS11FQ6ZWK6 438 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 FJX1Q86VR8 437 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 NRMQ8IXM6 262 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 C9orf106Q8NAJ2 232 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 OR4K5Q8NGD3 323 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 OR5J2Q8NH18 312 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 SLCO4A1Q96BD0 722 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 SLC25A36Q96CQ1 311 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 BPIFA2Q96DR5 249 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 NRBF2Q96F24 287 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 BDH2Q9BUT1 245 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 NDEL1Q9GZM8 345 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 BCO1Q9HAY6 547 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 CHST11Q9NPF2 352 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 FANCFQ9NPI8 374 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 C6orf203Q9P0P8 240 aaPredicted RBP10.88□□□□□ -0.67
DDX55-210ENST00000543016 EMC9Q9Y3B6 208 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 SAMHD1Q9Y3Z3 626 aaKnown RBP10.88□□□□□ -0.67
DDX55-210ENST00000543016 TRBV4-1A0A0J9YWV2 114 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 ARRDC5A6NEK1 342 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 ERICH4A6NGS2 130 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 ENO4A6NNW6 628 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 CLOCKO15516 846 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 RRP9O43818 475 aaKnown RBP10.87□□□□□ -0.67
DDX55-210ENST00000543016 SS18L1O75177 396 aaPredicted RBP10.87□□□□□ -0.67
DDX55-210ENST00000543016 AQP8O94778 261 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 OR6A2O95222 327 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 CH25HO95992 272 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 YES1P07947 543 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 ASAH2BP0C7U1 165 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 TMIGD3P0DMS9 266 aaPredicted RBP10.87□□□□□ -0.67
DDX55-210ENST00000543016 GRPRP30550 384 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 CHRNB4P30926 498 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 RASGEF1BQ0VAM2 473 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 ZP4Q12836 540 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 PMS2P3Q13401 168 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 ATP6AP1Q15904 470 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 TMEM201Q5SNT2 666 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 PPP4R4Q6NUP7 873 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 C3P1Q6ZMU1 363 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 P3H2Q8IVL5 708 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 TMEM99Q8N816 258 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 OR4C15Q8NGM1 316 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 OR52J3Q8NH60 311 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 ROBO4Q8WZ75 1007 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 CCDC120Q96HB5 630 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 OXGR1Q96P68 337 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 PIGMQ9H3S5 423 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 PARPBPQ9NWS1 579 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 KLHL13Q9P2N7 655 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 MYO18BQ8IUG5 2567 aa10.87□□□□□ -0.67
DDX55-210ENST00000543016 PHF3Q92576 2039 aaKnown RBP10.87□□□□□ -0.67
DDX55-210ENST00000543016 MPDZO75970 2070 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 A0A1W2PNV4 684 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 EFCAB9A8MZ26 197 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 M0R082 166 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 KPNA4O00629 521 aaPredicted RBP10.86□□□□□ -0.67
DDX55-210ENST00000543016 PLPP3O14495 311 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 DVL2O14641 736 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 AKAP8O43823 692 aaKnown RBP10.86□□□□□ -0.67
DDX55-210ENST00000543016 OR10H3O60404 316 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 E2F6O75461 281 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 TOXO94900 526 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 CCNB2O95067 398 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 AKR7A3O95154 331 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 OMPP47874 163 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 P2RY4P51582 365 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 PRPS1P60891 318 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 LTBQ06643 244 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 PUDPQ08623 228 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 SLC17A1Q14916 467 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 GUSBP1Q15486 140 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 MICAQ29983 383 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 EXOC3L2Q2M3D2 409 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 SLC25A35Q3KQZ1 300 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 C1orf94Q6P1W5 598 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 FAM214BQ7L5A3 538 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 SLC46A3Q7Z3Q1 461 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 NANOGNBQ7Z5D8 188 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 PXKQ7Z7A4 578 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 MARVELD2Q8N4S9 558 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 ZNF808Q8N4W9 903 aaPredicted RBP10.86□□□□□ -0.67
DDX55-210ENST00000543016 FAM26EQ8N5C1 309 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 OR6K3Q8NGY3 331 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 PFN4Q8NHR9 129 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 ZNF417Q8TAU3 575 aa10.86□□□□□ -0.67
DDX55-210ENST00000543016 ABHD3Q8WU67 409 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms