RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CA3P07451 260 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 CD3GP09693 182 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ANKRD34CP0C6C1 535 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SULT1A3P0DMM9 295 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SULT1A4P0DMN0 295 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SNRPBP14678 240 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 PVRP15151 417 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 HIST1H1CP16403 213 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 STOMP27105 288 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 OR3A3P47888 321 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SRP9P49458 86 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 GBX2P52951 348 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 HCCSP53701 268 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC16A1P53985 500 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 PER3P56645 1201 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SRP54P61011 504 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 YPEL5P62699 121 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 RPS4XP62701 263 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 IGLV3-21P80748 117 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 HSF2Q03933 536 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 IL10RAQ13651 578 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 GSG1Q2KHT4 349 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ALG10BQ5I7T1 473 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 UBE2NLQ5JXB2 153 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ZBTB37Q5TC79 503 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC22A10Q63ZE4 541 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ANKRD54Q6NXT1 300 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ULK3Q6PHR2 472 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 KIRREL2Q6UWL6 708 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 DPY19L2P2Q6ZN68 376 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF550Q7Z398 422 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC35F2Q8IXU6 374 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 FAM109AQ8N4B1 249 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ARL14Q8N4G2 192 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TOMM5Q8N4H5 51 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF655Q8N720 491 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 CSNK1A1LQ8N752 337 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 DTX3Q8N9I9 347 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 NPEPL1Q8NDH3 523 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 OR52R1Q8NGF1 315 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 OR52E2Q8NGJ4 325 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SMIM4Q8WVI0 70 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNRF4Q8WWF5 429 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 FGF14Q92915 247 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ZMYND19Q96E35 227 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SGTBQ96EQ0 304 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 VSTM2LQ96N03 204 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 PTCHD1Q96NR3 888 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ERMAPQ96PL5 475 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 GPX7Q96SL4 187 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 CDCA3Q99618 268 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 GFI1Q99684 422 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ACTR6Q9GZN1 396 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 LRRN3Q9H3W5 708 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 HEXA-AS1Q9H8Q6 139 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 NRIP3Q9NQ35 241 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 POT1Q9NUX5 634 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 NCDNQ9UBB6 729 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ING4Q9UNL4 249 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 CA5BQ9Y2D0 317 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 YBX2Q9Y2T7 364 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TTC28Q96AY4 2481 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 TRAV6A0A075B6T7 132 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 A0A0B4J203 849 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 A0A1B0GVI7 797 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 TRABD2BA6NFA1 517 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 MCIDASD6RGH6 385 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 GPR171O14626 319 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 PIN1P1O15428 100 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 HCRTR1O43613 425 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 PPM1BO75688 479 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 RASGRP1O95267 797 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 GHRHP01286 108 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 RAF1P04049 648 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 WNT1P04628 370 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 H2AFB2P0C5Z0 115 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 ANXA3P12429 323 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 HOXB2P14652 356 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 SPI1P17947 270 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 CXCL3P19876 107 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 HNRNPA2B1P22626 353 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 GIFP27352 417 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 DPP4P27487 766 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 NUDT1P36639 197 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 MNDAP41218 407 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 GPR143P51810 404 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 PSMD4P55036 377 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 CRYZQ08257 329 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 LGALS3BPQ08380 585 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 ILF3Q12906 894 aaKnown RBP eCLIP4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 CAMK2DQ13557 499 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 FAM53BQ14153 422 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 PON3Q15166 354 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 ST3GAL2Q16842 350 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 C21orf62-AS1Q17RA5 79 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 TM4SF20Q53R12 229 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 ESCO2Q56NI9 601 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 ELFN2Q5R3F8 820 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 LINC01590Q5TEZ4 76 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms