RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CXCL2P19875 107 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 BDH1Q02338 343 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 HTR4Q13639 388 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 MFSD13AQ14CX5 517 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 LINC00303Q3SY05 128 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 FAM198BQ6UWH4 519 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 Q6ZSR6 202 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 SLITRK4Q8IW52 837 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 OR4N2Q8NGD1 307 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 LIN7BQ9HAP6 207 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 CAMK2AQ9UQM7 478 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 A0A1B0GVI7 797 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 A0A1B0GWA3 101 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 TCRBV21S2A2A0A5A6 115 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 ARL6IP5O75915 188 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 EIPR1Q53HC9 387 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 TMEM69Q5SWH9 247 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 C3P1Q6ZMU1 363 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 ZNF619Q8N2I2 560 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 BOLLQ8N9W6 283 aaKnown RBP14.07□□□□□ -0.16
CNOT9-208ENST00000542068 ZNF511Q8NB15 262 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 TMEM52Q8NDY8 209 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 SYNPRQ8TBG9 265 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 RASD2Q96D21 266 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 TMEM138Q9NPI0 162 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 OR10H1Q9Y4A9 318 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 M6PRP20645 277 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 RPS15AP62244 130 aaKnown RBP14.07□□□□□ -0.16
CNOT9-208ENST00000542068 ERVK-25P63136 954 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 ALG10BQ5I7T1 473 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 SLC22A10Q63ZE4 541 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 HEPHL1Q6MZM0 1159 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 ZNF613Q6PF04 617 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 PXKQ7Z7A4 578 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 SLC35F2Q8IXU6 374 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 OR8S1Q8NH09 359 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 PHOSPHO2Q8TCD6 241 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 GAL3ST3Q96A11 431 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 TAS2R10Q9NYW0 307 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 GTF2A1LQ9UNN4 478 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 A0A0A6YYC8 382 aaPredicted RBP14.07□□□□□ -0.16
CNOT9-208ENST00000542068 URADA6NGE7 173 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 MCIDASD6RGH6 385 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 ATP6V1G2-DDX39BF2Z307 99 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 I3L1I5 382 aaPredicted RBP14.07□□□□□ -0.16
CNOT9-208ENST00000542068 MAS1P04201 325 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 SRMP19623 302 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 EMDP50402 254 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 TAS2R43P59537 309 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 CDK5R1Q15078 307 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 CLLU1Q5K131 121 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 NR4A3Q92570 626 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 FOXN4Q96NZ1 517 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 FLRT3Q9NZU0 649 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 NPFFR2Q9Y5X5 522 aa14.07□□□□□ -0.16
CNOT9-208ENST00000542068 TEX51A0A1B0GUA7 166 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 KDM4BO94953 1096 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 IFNGP01579 166 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 CT62P0C5K7 136 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 RRASP10301 218 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 MAOBP27338 520 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 MAZP56270 477 aaKnown RBP14.06□□□□□ -0.16
CNOT9-208ENST00000542068 TNFRSF17Q02223 184 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 PLA2G7Q13093 441 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 ARHGAP11BQ3KRB8 267 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 GARNL3Q5VVW2 1013 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 C11orf88Q6PI97 169 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 RTL10Q7L3V2 364 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 SMIM4Q8WVI0 70 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 C10orf90Q96M02 699 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 TRAF4Q9BUZ4 470 aaPredicted RBP14.06□□□□□ -0.16
CNOT9-208ENST00000542068 ARL6Q9H0F7 186 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 KIR3DX1Q9H7L2 352 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 SDHAF2Q9NX18 166 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 DAPP1Q9UN19 280 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 CYP8B1Q9UNU6 501 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 PIAS3Q9Y6X2 628 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 G3V3Q6 166 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 HCRTR1O43613 425 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 KRT33AO76009 404 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 ATP1B1P05026 303 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 NID1P14543 1247 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 TUSC1Q2TAM9 212 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 PRAMEF8Q5VWM4 474 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 PRAMEF7Q5VXH5 474 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 CFAP77Q6ZQR2 320 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 CSNK1A1LQ8N752 337 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 CAMKVQ8NCB2 501 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 ZDHHC1Q8WTX9 485 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 FCAMRQ8WWV6 532 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 RBM18Q96H35 190 aaKnown RBP14.06□□□□□ -0.16
CNOT9-208ENST00000542068 CNN2Q99439 309 aaKnown RBP14.06□□□□□ -0.16
CNOT9-208ENST00000542068 KCNK15Q9H427 330 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 COPZ2Q9P299 210 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 HEBP2Q9Y5Z4 205 aa14.06□□□□□ -0.16
CNOT9-208ENST00000542068 BLOC1S5-TXNDC5H3BN57 136 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 H7C1C5 153 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 PIN1P1O15428 100 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 DBIP07108 87 aaKnown RBP14.05□□□□□ -0.16
CNOT9-208ENST00000542068 OR8G3PP0DMU2 310 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms