RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 CTPS2Q9NRF8 586 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 DECR2Q9NUI1 292 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 ACER3Q9NUN7 267 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 PCTPQ9UKL6 214 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 PCDHGB5Q9Y5G0 923 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 POMT1Q9Y6A1 747 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 DSPPQ9NZW4 1301 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 MANBAO00462 879 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 PPP6CO00743 305 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 ANKRD28O15084 1053 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 GPR37O15354 613 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 XPNPEP2O43895 674 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 RSL1D1O76021 490 aaKnown RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 OTCP00480 354 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 MELTFP08582 738 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 CCNA2P20248 432 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 CD80P33681 288 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 SPRP35270 261 aaPredicted RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 SELENOPP49908 381 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 ARF1P84077 181 aaKnown RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 GALK2Q01415 458 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 ROR2Q01974 943 aaKnown RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 BTKQ06187 659 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 ZNF763Q0D2J5 394 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 PDIA2Q13087 525 aaKnown RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 LCP2Q13094 533 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 FXNQ16595 210 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 TRMT5Q32P41 509 aaKnown RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 EXOSC6Q5RKV6 272 aaKnown RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 FOXB2Q5VYV0 432 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 FAM71E1Q6IPT2 247 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 BRD3OSQ6XYD6 125 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 GPAT4Q86UL3 456 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 BHLHE22Q8NFJ8 381 aaPredicted RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 SNX33Q8WV41 574 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 CCL17Q92583 94 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 CDS1Q92903 461 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 UPRTQ96BW1 309 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 MARS2Q96GW9 593 aaKnown RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 FAM71F1Q96KD3 344 aaPredicted RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 SF3B5Q9BWJ5 86 aaKnown RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 ACPTQ9BZG2 426 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 NMUR2Q9GZQ4 415 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 IQCGQ9H095 443 aaKnown RBP6.88□□□□□ -1.31
KLHL42-203ENST00000540301 SAP30LQ9HAJ7 183 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 NKIRAS2Q9NYR9 191 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 TAAR3PQ9P1P4 343 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 GPR160Q9UJ42 338 aa6.88□□□□□ -1.31
KLHL42-203ENST00000540301 DNAH9Q9NYC9 4486 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 NPIPB9F8W1W9 429 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 STX16-NPEPL1H3BU86 382 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 LCE2BO14633 110 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 STX16O14662 325 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 GPR137BO60478 399 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 ZNF432O94892 652 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 OR4F21O95013 312 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 KRT6AP02538 564 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 KRT6BP04259 564 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 IMPDH2P12268 514 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 TSPAN8P19075 237 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 SLC6A9P48067 706 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 KRT6CP48668 564 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 CDH13P55290 713 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 SELENOVP59797 346 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 SEC61A1P61619 476 aaKnown RBP6.87□□□□□ -1.31
KLHL42-203ENST00000540301 DBPQ10586 325 aaPredicted RBP6.87□□□□□ -1.31
KLHL42-203ENST00000540301 SKP2Q13309 424 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 NRN1LQ496H8 165 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 KLHL22Q53GT1 634 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 GRTP1Q5TC63 336 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 NIPAL3Q6P499 406 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 KLC3Q6P597 504 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 Q6ZSV7 163 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 Q6ZTK2 550 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 RPS27LQ71UM5 84 aaKnown RBP6.87□□□□□ -1.31
KLHL42-203ENST00000540301 GRINAQ7Z429 371 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 CCDC36Q8IYA8 594 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 ZSCAN4Q8NAM6 433 aaPredicted RBP6.87□□□□□ -1.31
KLHL42-203ENST00000540301 ZNF563Q8TA94 476 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 MGARPQ8TDB4 240 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 ELMOD3Q96FG2 381 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 MS4A14Q96JA4 679 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 DIRC2Q96SL1 478 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 STACQ99469 402 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 PIGUQ9H490 435 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 SERHL2Q9H4I8 314 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 PIF1Q9H611 641 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 C16orf95Q9H693 158 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 ACSS3Q9H6R3 686 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 DUSP22Q9NRW4 184 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 OR5V1Q9UGF6 321 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 ZNF225Q9UK10 706 aa6.87□□□□□ -1.31
KLHL42-203ENST00000540301 DYNC2H1Q8NCM8 4307 aaKnown RBP6.87□□□□□ -1.31
KLHL42-203ENST00000540301 A8MXK9 166 aa6.86□□□□□ -1.31
KLHL42-203ENST00000540301 PDPK1O15530 556 aa6.86□□□□□ -1.31
KLHL42-203ENST00000540301 URI1O94763 535 aaPredicted RBP6.86□□□□□ -1.31
KLHL42-203ENST00000540301 KLHL2O95198 593 aa6.86□□□□□ -1.31
KLHL42-203ENST00000540301 CLPTM1O96005 669 aa6.86□□□□□ -1.31
KLHL42-203ENST00000540301 C2P06681 752 aa6.86□□□□□ -1.31
KLHL42-203ENST00000540301 SFTPBP07988 381 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms