RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 TRMT61AQ96FX7 289 aaKnown RBP13.19□□□□□ -0.3
USB1-203ENST00000539737 LRRC37BQ96QE4 947 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 CCT8L2Q96SF2 557 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 HDHD5Q9BXW7 423 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 TRIM2Q9C040 744 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 OR10A4Q9H209 315 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 EVA1AQ9H8M9 152 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 GP6Q9HCN6 339 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 SLC13A4Q9UKG4 626 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 B3GALT5Q9Y2C3 310 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 FAM220BPB1ANY3 271 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 SHISA9B4DS77 424 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 AP3D1O14617 1153 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 AIM2O14862 343 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 PRKD3O94806 890 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 IFNA2P01563 188 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 FKBP2P26885 142 aaKnown RBP13.18□□□□□ -0.3
USB1-203ENST00000539737 AQP1P29972 269 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 SLC1A3P43003 542 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 IDH2P48735 452 aaKnown RBP13.18□□□□□ -0.3
USB1-203ENST00000539737 NUDT2P50583 147 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 PCBP3P57721 371 aaKnown RBP13.18□□□□□ -0.3
USB1-203ENST00000539737 VMACQ2NL98 169 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 SFRP5Q5T4F7 317 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 FCRLAQ7L513 359 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 CALHM3Q86XJ0 350 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 ARMC8Q8IUR7 673 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 ZNF525Q8N782 197 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 RNF128Q8TEB7 428 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 HS6ST2Q96MM7 605 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 HOPXQ9BPY8 73 aaPredicted RBP13.18□□□□□ -0.3
USB1-203ENST00000539737 NGBQ9NPG2 151 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 KLHL9Q9P2J3 617 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 CHRNA9Q9UGM1 479 aa13.18□□□□□ -0.3
USB1-203ENST00000539737 A0A1W2PR80 420 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 NDUFAB1O14561 156 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 ENPP1P22413 925 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 GZMMP51124 257 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 POLR2HP52434 150 aaKnown RBP13.17□□□□□ -0.3
USB1-203ENST00000539737 CDH11P55287 796 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 RAC3P60763 192 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 TMEM249Q2WGJ8 235 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 FAM91A1Q658Y4 838 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 B3GLCTQ6Y288 498 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 CLIP4Q8N3C7 705 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 RASSF5Q8WWW0 418 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 ZHX1-C8orf76Q96EF9 292 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 DNAJA3Q96EY1 480 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 USB1Q9BQ65 265 aaKnown RBP13.17□□□□□ -0.3
USB1-203ENST00000539737 C19orf24Q9BVV8 132 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 CACNG6Q9BXT2 260 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 CTPS2Q9NRF8 586 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 CISD1Q9NZ45 108 aaKnown RBP13.17□□□□□ -0.3
USB1-203ENST00000539737 KLHL13Q9P2N7 655 aa13.17□□□□□ -0.3
USB1-203ENST00000539737 A0A1W2PNR3 127 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 HAX1O00165 279 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 IGHV3-9P01782 118 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 YES1P07947 543 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 GKN3PP0CG01 181 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 FAM157CP0CG43 387 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 TFPIP10646 304 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 ACAA2P42765 397 aaKnown RBP13.16□□□□□ -0.3
USB1-203ENST00000539737 MAP2K6P52564 334 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 NCALDP61601 193 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 CSNK2A1P68400 391 aaPredicted RBP13.16□□□□□ -0.3
USB1-203ENST00000539737 SYT14P1Q58G82 188 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 WBP2NLQ6ICG8 309 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 BHLHA15Q7RTS1 189 aaPredicted RBP13.16□□□□□ -0.3
USB1-203ENST00000539737 CADM2Q8N3J6 435 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 CCDC197Q8NCU1 140 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 OR2T12Q8NG77 320 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 KISS1RQ969F8 398 aaPredicted RBP13.16□□□□□ -0.3
USB1-203ENST00000539737 OR5B2Q96R09 309 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 ZNF300Q96RE9 604 aaPredicted RBP13.16□□□□□ -0.3
USB1-203ENST00000539737 KCNK17Q96T54 332 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 ESRP2Q9H6T0 727 aaKnown RBP13.16□□□□□ -0.3
USB1-203ENST00000539737 COQ10BQ9H8M1 238 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 TESQ9UGI8 421 aaKnown RBP13.16□□□□□ -0.3
USB1-203ENST00000539737 ING1Q9UK53 422 aaPredicted RBP13.16□□□□□ -0.3
USB1-203ENST00000539737 CHST2Q9Y4C5 530 aa13.16□□□□□ -0.3
USB1-203ENST00000539737 TMED7-TICAM2A0A0A6YYA0 188 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 SLC35F4A4IF30 521 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 E7EQL1 145 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 ABCD4O14678 606 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 ZNF208O43345 1280 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 MFN2O95140 757 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
USB1-203ENST00000539737 TACR3P29371 465 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 CLK1P49759 484 aaKnown RBP13.15□□□□□ -0.3
USB1-203ENST00000539737 SLC7A2P52569 658 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 RGS8P57771 180 aaPredicted RBP13.15□□□□□ -0.3
USB1-203ENST00000539737 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 C8orf82Q6P1X6 216 aaPredicted RBP13.15□□□□□ -0.3
USB1-203ENST00000539737 CCDC80Q76M96 950 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 SLC26A7Q8TE54 656 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 DDIT4LQ96D03 193 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 ZNF583Q96ND8 569 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 PIF1Q9H611 641 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 CHODLQ9H9P2 273 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms