RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 LOXL2Q9Y4K0 774 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 B4E171 279 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 KLF4O43474 513 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 TSPAN2O60636 221 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 HLA-DQB1P01920 261 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 TBXA2RP21731 343 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 TSPAN7P41732 249 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 FABP5Q01469 135 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 RAB40BQ12829 278 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZSWIM7Q19AV6 140 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 CBLN3Q6UW01 205 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 KIRREL2Q6UWL6 708 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 LIX1LQ8IVB5 337 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 LSMEM1Q8N8F7 131 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 C19orf18Q8NEA5 215 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 OR8D4Q8NGM9 314 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 DEDD2Q8WXF8 326 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 LPAR4Q99677 370 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 FGF20Q9NP95 211 aaPredicted RBP15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 ISYNA1Q9NPH2 558 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 MRPS18AQ9NVS2 196 aaKnown RBP15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 KCNN3Q9UGI6 736 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 GPN3Q9UHW5 284 aaPredicted RBP15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 SLC35A3Q9Y2D2 325 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 GSTK1Q9Y2Q3 226 aa15.59■□□□□ 0.09
PCDHB17P-201ENST00000539533 PSKH1P11801 424 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 IFI30P13284 250 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 FUT1P19526 365 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 M6PRP20645 277 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 FPR3P25089 353 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 GABRA5P31644 462 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 SMSP52788 366 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 ALG10BQ5I7T1 473 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 TIGD3Q6B0B8 471 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 CNIH2Q6PI25 160 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 FAM198BQ6UWH4 519 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 GLCCI1Q86VQ1 547 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 Q8N402 240 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZC3HAV1LQ96H79 300 aaKnown RBP15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 LRFN5Q96NI6 719 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 SOSTQ9BQB4 213 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 PPP1R3EQ9H7J1 279 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 WDR54Q9H977 334 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 AKAP7Q9P0M2 348 aaPredicted RBP15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 MALT1Q9UDY8 824 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 ALG5Q9Y673 324 aa15.58■□□□□ 0.09
PCDHB17P-201ENST00000539533 C17orf51A8MQB3 221 aa15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 PRODHO43272 600 aa15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 CHP2O43745 196 aa15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 ZNF354AO60765 605 aaPredicted RBP15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 RFPL3O75679 317 aa15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 FGF9P31371 208 aaPredicted RBP15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 ADH7P40394 386 aa15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 RASSF6Q6ZTQ3 369 aa15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 RAB11FIP2Q7L804 512 aa15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 PLCZ1Q86YW0 608 aa15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 DPH1Q9BZG8 443 aa15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 MEPEQ9NQ76 525 aaPredicted RBP15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 RBFOX1Q9NWB1 397 aaKnown RBP15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 PPIEQ9UNP9 301 aaKnown RBP15.58■□□□□ 0.08
PCDHB17P-201ENST00000539533 IRGMA1A4Y4 181 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 CASKO14936 926 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 NOS1APO75052 506 aaPredicted RBP15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 TRIM3O75382 744 aaPredicted RBP15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 MAKP20794 623 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 GZMKP49863 264 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 SNRPD2P62316 118 aaKnown RBP15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 ISXQ2M1V0 245 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 CDONQ4KMG0 1287 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 CLEC12AQ5QGZ9 265 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 DCAF12Q5T6F0 453 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 MZT2BQ6NZ67 158 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 CD200R1LQ6Q8B3 271 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 RNF113BQ8IZP6 322 aaKnown RBP15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 ZFP41Q8N8Y5 198 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 FAM71CQ8NEG0 241 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 C17orf47Q8NEP4 570 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 TMEM163Q8TC26 289 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 KLHDC3Q9BQ90 382 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 IL20RAQ9UHF4 553 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 TEKT2Q9UIF3 430 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 TRBV11-1A0A0K0K1C0 115 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 GTPBP1O00178 669 aaKnown RBP15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 GNB5O14775 395 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 AKR7A2O43488 359 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 HPGDSO60760 199 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 KLF7O75840 302 aaPredicted RBP15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 UQCRC1P31930 480 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 MTNR1AP48039 350 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 P2RY14Q15391 338 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 BTBD16Q32M84 506 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 DUSP18Q8NEJ0 188 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 OR4M1Q8NGD0 313 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 B3GAT2Q9NPZ5 323 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 GPR52Q9Y2T5 361 aa15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 EXOSC1Q9Y3B2 195 aaKnown RBP15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 PTRH2Q9Y3E5 179 aaKnown RBP15.57■□□□□ 0.08
PCDHB17P-201ENST00000539533 TMEM200CA6NKL6 621 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 SNTNA6NMZ2 147 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 B8ZZF3 427 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms