RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 LSMEM1Q8N8F7 131 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 ZIC4Q8N9L1 334 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 HIPK4Q8NE63 616 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 STK35Q8TDR2 534 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 TMEM45BQ96B21 275 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 WFDC6Q9BQY6 131 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 BDH2Q9BUT1 245 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 PTDSS2Q9BVG9 487 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 C1QTNF6Q9BXI9 259 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 C12orf10Q9HB07 376 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 PARPBPQ9NWS1 579 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 RPS6KB2Q9UBS0 482 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 CSPG4Q6UVK1 2322 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 CHD3Q12873 2000 aaKnown RBP13.14□□□□□ -0.31
RAB40B-202ENST00000538809 ELOA3DA6NLF2 546 aaPredicted RBP13.14□□□□□ -0.31
RAB40B-202ENST00000538809 M0R1B8 84 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 TPST2O60704 377 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 MFN2O95140 757 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 AHSA1O95433 338 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 LY6G6DO95868 133 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 TROVE2P10155 538 aaKnown RBP eCLIP13.14□□□□□ -0.31
RAB40B-202ENST00000538809 CDH2P19022 906 aaPredicted RBP13.14□□□□□ -0.31
RAB40B-202ENST00000538809 SLC6A2P23975 617 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 RPS5P46782 204 aaKnown RBP13.14□□□□□ -0.31
RAB40B-202ENST00000538809 GZMMP51124 257 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 MTPNP58546 118 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 DMTNQ08495 405 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 RBBP4Q09028 425 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 ELOA3BQ3SY89 546 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 ELOA3Q8NG57 546 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 GTPBP3Q969Y2 492 aaKnown RBP13.14□□□□□ -0.31
RAB40B-202ENST00000538809 SLC25A36Q96CQ1 311 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 KTI12Q96EK9 354 aaPredicted RBP13.14□□□□□ -0.31
RAB40B-202ENST00000538809 SPATA5L1Q9BVQ7 753 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 SF3B5Q9BWJ5 86 aaKnown RBP13.14□□□□□ -0.31
RAB40B-202ENST00000538809 PRR14Q9BWN1 585 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 AMBRA1Q9C0C7 1298 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 SLCO5A1Q9H2Y9 848 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
RAB40B-202ENST00000538809 CISD1Q9NZ45 108 aaKnown RBP13.14□□□□□ -0.31
RAB40B-202ENST00000538809 SEC14L4Q9UDX3 406 aa13.14□□□□□ -0.31
RAB40B-202ENST00000538809 YLPM1P49750 1951 aaKnown RBP13.13□□□□□ -0.31
RAB40B-202ENST00000538809 A0A1B0GWA3 101 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 OVOL3O00110 214 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 FXYD1O00168 92 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 TMCC2O75069 709 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 HEXAP06865 529 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 PNMTP11086 282 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 SELENOPP49908 381 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 ARFIP2P53365 341 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 GUCY1A3Q02108 690 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 NFYCQ13952 458 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 TMEM225Q6GV28 225 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 OR7E24Q6IFN5 339 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 KLHL17Q6TDP4 642 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 TMEM108Q6UXF1 575 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 KRT73Q86Y46 540 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 KDM8Q8N371 416 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 WDR31Q8NA23 367 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 C11orf65Q8NCR3 313 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 MUS81Q96NY9 551 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 ALKBH3Q96Q83 286 aaPredicted RBP13.13□□□□□ -0.31
RAB40B-202ENST00000538809 ZNF607Q96SK3 696 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 TRAF4Q9BUZ4 470 aaPredicted RBP13.13□□□□□ -0.31
RAB40B-202ENST00000538809 ALG2Q9H553 416 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 PIF1Q9H611 641 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 SAR1AQ9NR31 198 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 SLC17A5Q9NRA2 495 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 ANGPT4Q9Y264 503 aa13.13□□□□□ -0.31
RAB40B-202ENST00000538809 IGKV1D-42A0A075B6H8 117 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 PRORSD1PA6NEY8 169 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 NDUFS7O75251 213 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 CD40P25942 277 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 GTF2E2P29084 291 aaKnown RBP13.12□□□□□ -0.31
RAB40B-202ENST00000538809 MPGP29372 298 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 RGS8P57771 180 aaPredicted RBP13.12□□□□□ -0.31
RAB40B-202ENST00000538809 NCALDP61601 193 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 KLF10Q13118 480 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 VEZF1Q14119 521 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 TRMT5Q32P41 509 aaKnown RBP13.12□□□□□ -0.31
RAB40B-202ENST00000538809 COQ5Q5HYK3 327 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 NIPAL3Q6P499 406 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 SLC22A25Q6T423 547 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 B3GLCTQ6Y288 498 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 CREB3L2Q70SY1 520 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 SSX8Q7RTT4 187 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 POMGNT2Q8NAT1 580 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 C1orf162Q8NEQ5 155 aaPredicted RBP13.12□□□□□ -0.31
RAB40B-202ENST00000538809 BHLHE22Q8NFJ8 381 aaPredicted RBP13.12□□□□□ -0.31
RAB40B-202ENST00000538809 GPR32P1Q8NGA4 272 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 MFSD8Q8NHS3 518 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 RNF217Q8TC41 542 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 TRMT61AQ96FX7 289 aaKnown RBP13.12□□□□□ -0.31
RAB40B-202ENST00000538809 MED4Q9NPJ6 270 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 TESQ9UGI8 421 aaKnown RBP13.12□□□□□ -0.31
RAB40B-202ENST00000538809 POU2F3Q9UKI9 436 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 AMDHD2Q9Y303 409 aa13.12□□□□□ -0.31
RAB40B-202ENST00000538809 A0A0B4J2E0 115 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 A0A1B0GX12 115 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 E7EQL1 145 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms