RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 GLCEO94923 617 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 CD1AP06126 327 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 TACR3P29371 465 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 KIR2DL3P43628 341 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 RPS5P46782 204 aaKnown RBP12.76□□□□□ -0.37
LIMK1-208ENST00000538333 TMED10P49755 219 aaKnown RBP12.76□□□□□ -0.37
LIMK1-208ENST00000538333 RPS11P62280 158 aaKnown RBP eCLIP12.76□□□□□ -0.37
LIMK1-208ENST00000538333 SIRPAP78324 504 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 SHBQ15464 509 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 ZNF544Q6NX49 715 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 KMT5CQ86Y97 462 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 C7orf57Q8NEG2 295 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 DAZLQ92904 295 aaKnown RBP12.76□□□□□ -0.37
LIMK1-208ENST00000538333 KTI12Q96EK9 354 aaPredicted RBP12.76□□□□□ -0.37
LIMK1-208ENST00000538333 LPAR4Q99677 370 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 KCNJ15Q99712 375 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 WWTR1Q9GZV5 400 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 CYSLTR2Q9NS75 346 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 PAIP2BQ9ULR5 123 aaKnown RBP12.76□□□□□ -0.37
LIMK1-208ENST00000538333 A0A1W2PQD3 144 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 C17orf51A8MQB3 221 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 B4DXG7 233 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 TXNDC12O95881 172 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 GDI2P50395 445 aaKnown RBP12.76□□□□□ -0.37
LIMK1-208ENST00000538333 NR0B1P51843 470 aaKnown RBP12.76□□□□□ -0.37
LIMK1-208ENST00000538333 GBX2P52951 348 aaPredicted RBP12.76□□□□□ -0.37
LIMK1-208ENST00000538333 SLC25A1P53007 311 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 DMWDQ09019 674 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 ALG10Q5BKT4 473 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 ARHGAP40Q5TG30 622 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 C1orf189Q5VU69 101 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 LEG1Q6P5S2 330 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 LRRC28Q86X40 367 aaPredicted RBP12.76□□□□□ -0.37
LIMK1-208ENST00000538333 ZNF441Q8N8Z8 693 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 OR1N1Q8NGS0 311 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 OR6K6Q8NGW6 343 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 OR6F1Q8NGZ6 308 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 RPS4Y2Q8TD47 263 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 SNX33Q8WV41 574 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 NUDT22Q9BRQ3 303 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 FGF21Q9NSA1 209 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 ACOXLQ9NUZ1 547 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 RASD1Q9Y272 281 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 SLC6A5Q9Y345 797 aa12.76□□□□□ -0.37
LIMK1-208ENST00000538333 CACNA1EQ15878 2313 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 TRAV1-2A0A0B4J238 106 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 MEIOCA2RUB1 952 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 ALG1L2C9J202 215 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 ATP6V1G1O75348 118 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 FAM157BP0CG42 384 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 IL12BP29460 328 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 SDHAP31040 664 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 SLC6A8P48029 635 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 CTXN1P60606 82 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 KCNJ8Q15842 424 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 CCDC58Q4VC31 144 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 WDR45BQ5MNZ6 344 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 YOD1Q5VVQ6 348 aaPredicted RBP12.75□□□□□ -0.37
LIMK1-208ENST00000538333 TRIQKQ629K1 86 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 RPL22L1Q6P5R6 122 aaKnown RBP12.75□□□□□ -0.37
LIMK1-208ENST00000538333 IL20RBQ6UXL0 311 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 PRSS58Q8IYP2 241 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 C10orf53Q8N6V4 93 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 ZNF563Q8TA94 476 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 THAP4Q8WY91 577 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 ZC3HAV1LQ96H79 300 aaKnown RBP12.75□□□□□ -0.37
LIMK1-208ENST00000538333 DPYSL5Q9BPU6 564 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 ALG12Q9BV10 488 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 ZNF768Q9H5H4 540 aaKnown RBP12.75□□□□□ -0.37
LIMK1-208ENST00000538333 EXTL2Q9UBQ6 330 aa12.75□□□□□ -0.37
LIMK1-208ENST00000538333 TMEM221A6NGB7 291 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 PRR32B1ATL7 298 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 FAM25AB3EWG3 89 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 FAM25CB3EWG5 89 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 FAM25GB3EWG6 89 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 TFECO14948 347 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-208ENST00000538333 CCNKO75909 580 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 SERPINA3P01011 423 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 EIF4EP06730 217 aaKnown RBP12.74□□□□□ -0.37
LIMK1-208ENST00000538333 HSF2Q03933 536 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 RPL18Q07020 188 aaKnown RBP12.74□□□□□ -0.37
LIMK1-208ENST00000538333 TOMM34Q15785 309 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-208ENST00000538333 SLC25A35Q3KQZ1 300 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 ZNF684Q5T5D7 378 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 COX15Q7KZN9 410 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 MARCH3Q86UD3 253 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 EGFL6Q8IUX8 553 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 LSM14AQ8ND56 463 aaKnown RBP12.74□□□□□ -0.37
LIMK1-208ENST00000538333 TAAR8Q969N4 342 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-208ENST00000538333 RPRD1BQ9NQG5 326 aaKnown RBP12.74□□□□□ -0.37
LIMK1-208ENST00000538333 SLC22A11Q9NSA0 550 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 CTSFQ9UBX1 484 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 GNG8Q9UK08 70 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 POU2F3Q9UKI9 436 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 MKL2Q9ULH7 1088 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 A0A0B4J293 547 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 A0A0G2JMP0 313 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 A0A0X1KG70 313 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 HCRTR2O43614 444 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms