RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 LIPNQ5VXI9 398 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 LCN10Q6JVE6 187 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 NANOGP8Q6NSW7 305 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TNFAIP8L2Q6P589 184 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ASRGL1Q7L266 308 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MDGA2Q7Z553 956 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MTDHQ86UE4 582 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TIGD4Q8IY51 512 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 KRTCAP2Q8N6L1 136 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RBMXL3Q8N7X1 1067 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 FADS6Q8N9I5 356 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ASCC1Q8N9N2 400 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 STEAP2Q8NFT2 490 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 OR5M3Q8NGP4 307 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 NANPQ8TBE9 248 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GRHL3Q8TE85 626 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RNF138Q8WVD3 245 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ROBO4Q8WZ75 1007 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CDS1Q92903 461 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 C7orf34Q96L11 122 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 C3orf30Q96M34 536 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 KCNS3Q9BQ31 491 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TMUB1Q9BVT8 246 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MRPL37Q9BZE1 423 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ACTR6Q9GZN1 396 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 LRMDAQ9H2I8 198 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 DSN1Q9H410 356 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RIBC2Q9H4K1 309 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 KCNJ16Q9NPI9 418 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 KLHL1Q9NR64 748 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CMTM6Q9NX76 183 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 NPIPA1Q9UND3 350 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF443Q9Y2A4 671 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MED31Q9Y3C7 131 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CHD9Q3L8U1 2897 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 URB1O60287 2271 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MYLKQ15746 1914 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TRAV36DV7A0A075B6V5 113 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TRGV8A0A0C4DH27 118 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 LOC100506127A0A0U1RQW1 187 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 B2RBV5 119 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 NDUFS8O00217 210 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CXCR6O00574 342 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GNGT2O14610 69 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF195O14628 629 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 UGT2B17O75795 530 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CYP7B1O75881 506 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GLSO94925 669 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 UBOX5O94941 541 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RCBTB2O95199 551 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MED26O95402 600 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 PMS2P2O95744 297 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 WNT11O96014 354 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 IFNGP01579 166 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 BCHEP06276 602 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 FCER2P06734 321 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CT45A8P0DMV1 189 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CT45A9P0DMV2 189 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MAP3K8P41279 467 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ASCL1P50553 236 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 DAP3P51398 398 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TAS2R41P59536 307 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RAC3P60763 192 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 PSG6Q00889 435 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GLO1Q04760 184 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MED21Q13503 144 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CT45A2Q5DJT8 189 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SLX4IPQ5VYV7 408 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 KLHL17Q6TDP4 642 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RPS27LQ71UM5 84 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 DHFR2Q86XF0 187 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GALNT4Q8N4A0 578 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 POMGNT2Q8NAT1 580 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 OR2M3Q8NG83 312 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 OR52L1Q8NGH7 329 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 LRRC20Q8TCA0 184 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 NRG4Q8WWG1 115 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MYDGFQ969H8 173 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 BORCS5Q969J3 196 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TMEM19Q96HH6 336 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GMPPAQ96IJ6 420 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 PLEKHA8Q96JA3 519 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TXN2Q99757 166 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 AICDAQ9GZX7 198 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RBM38Q9H0Z9 239 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MMP27Q9H306 513 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SAV1Q9H4B6 383 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ALG2Q9H553 416 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF703Q9H7S9 590 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF71Q9NQZ8 489 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GSN-AS1Q9NRJ2 163 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SIRT3Q9NTG7 399 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 UFSP2Q9NUQ7 469 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ALKBH4Q9NXW9 302 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 COA4Q9NYJ1 87 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF629Q9UEG4 869 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GPR160Q9UJ42 338 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 PROCRQ9UNN8 238 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MGAT4BQ9UQ53 548 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms