RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PRDX1Q06830 199 aaKnown RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 TSTA3Q13630 321 aaPredicted RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 NDUFA9Q16795 377 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 ACSF3Q4G176 576 aaPredicted RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 SLC25A53Q5H9E4 307 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 ELFN2Q5R3F8 820 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 WLSQ5T9L3 541 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 KCTD11Q693B1 232 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 ADCK2Q7Z695 626 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 TMPRSS11BQ86T26 416 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 SLC22A16Q86VW1 577 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 HIPK1Q86Z02 1210 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 TMEM156Q8N614 296 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 SKA2Q8WVK7 121 aaPredicted RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 DYRK2Q92630 601 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 SYN2Q92777 582 aaPredicted RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 PIGQQ9BRB3 760 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 C19orf24Q9BVV8 132 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 CARD6Q9BX69 1037 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 DEFB126Q9BYW3 111 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 MRPL15Q9P015 296 aaKnown RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 C6orf203Q9P0P8 240 aaPredicted RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 SPATA7Q9P0W8 599 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 UVRAGQ9P2Y5 699 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 MTRF1LQ9UGC7 380 aaKnown RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 SLC2A6Q9UGQ3 507 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 EXOGQ9Y2C4 368 aaKnown RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 NAALAD2Q9Y3Q0 740 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 MED12LQ86YW9 2145 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 VWFP04275 2813 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 hCG_1818297A0A087WSY0 165 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 IGKV3D-11A0A0A0MRZ8 115 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 TRGV5A0A0B4J1U4 118 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ANKRD61A6NGH8 418 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 DEFB108AA8MXU0 73 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 HACD1B0YJ81 288 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 EEF1E1-BLOC1S5C9J1V9 151 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 TXNDC9O14530 226 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 KLF11O14901 512 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 EEF1E1O43324 174 aaKnown RBP4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ZNF354AO60765 605 aaPredicted RBP4.51□□□□□ -1.69
CLIP1-207ENST00000536634 OR2J2O76002 312 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 GOSR1O95249 250 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 APOA4P06727 396 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 GABRA1P14867 456 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 PPP2R1BP30154 601 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 CYLC1P35663 651 aaPredicted RBP4.51□□□□□ -1.69
CLIP1-207ENST00000536634 COILP38432 576 aaPredicted RBP4.51□□□□□ -1.69
CLIP1-207ENST00000536634 SOX3P41225 446 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 MARCKSL1P49006 195 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 SSR4P51571 173 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ZNF415Q09FC8 603 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 TNK1Q13470 666 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 TFDP2Q14188 446 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 SQLEQ14534 574 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ACKR1Q16570 336 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ANKRD20A2Q5SQ80 823 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ANKRD20A1Q5TYW2 823 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ANKRD20A3Q5VUR7 823 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 TTC23LQ6PF05 361 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 RGS9BPQ6ZS82 235 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 BZW1Q7L1Q6 419 aaKnown RBP4.51□□□□□ -1.69
CLIP1-207ENST00000536634 RTN4RL2Q86UN3 420 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 RAB42Q8N4Z0 105 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 OR10S1Q8NGN2 331 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 OR9A1PQ8NGU1 263 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 PHLDA1Q8WV24 401 aaPredicted RBP4.51□□□□□ -1.69
CLIP1-207ENST00000536634 SMPDL3AQ92484 453 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 P3H4Q92791 437 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 SPDL1Q96EA4 605 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 PRAP1Q96NZ9 151 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 P2RY12Q9H244 342 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 OPA3Q9H6K4 179 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 IL1RL2Q9HB29 575 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ANKHQ9HCJ1 492 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 HPF1Q9NWY4 346 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 NSMCE4AQ9NXX6 385 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ZNF629Q9UEG4 869 aaPredicted RBP4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ASIC3Q9UHC3 531 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 FBXW2Q9UKT8 454 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 WIF1Q9Y5W5 379 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 RYR3Q15413 4870 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 FREM1Q5H8C1 2179 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 ALPK2Q86TB3 2170 aa4.51□□□□□ -1.69
CLIP1-207ENST00000536634 DYSFO75923 2080 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 MALRD1Q5VYJ5 2156 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 H7C0C1 242 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 WWP2O00308 870 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 PRMT5O14744 637 aaPredicted RBP4.5□□□□□ -1.69
CLIP1-207ENST00000536634 ADAM20O43506 726 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 CHST10O43529 356 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 CD5LO43866 347 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 KIF5CO60282 957 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 LCMT2O60294 686 aaKnown RBP4.5□□□□□ -1.69
CLIP1-207ENST00000536634 HCN1O60741 890 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 DFFBO76075 338 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 MYO1DO94832 1006 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SLC16A8O95907 504 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SERPING1P05155 500 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms