RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 SLC22A23A1A5C7 686 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 MPTX1A8MV57 137 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 NEDD8-MDP1E9PL57 170 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 G3V3Q6 166 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ACOT7O00154 380 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 RTCAO00442 366 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ARPC1BO15143 372 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 VEGFDO43915 354 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 TMPRSS11DO60235 418 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 SUSD5O60279 629 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 GALR3O60755 368 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 POP7O75817 140 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 TOXO94900 526 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 HRGP04196 525 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 UCHL1P09936 223 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 SBK2P0C263 348 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 UBBP0CG47 229 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 UBCP0CG48 685 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 CALCBP10092 127 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ERGP11308 486 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 MYF5P13349 255 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ICAM2P13598 275 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 SNRPBP14678 240 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 GABRA1P14867 456 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ZNF3P17036 446 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ATF1P18846 271 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 CXCL2P19875 107 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 NT5EP21589 574 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 DRD5P21918 477 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ACADLP28330 430 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 RORAP35398 523 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 VEGFCP49767 419 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 RPS27AP62979 156 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 UBA52P62987 128 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 MESP2Q0VG99 397 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 FUT5Q11128 374 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 LASP1Q14847 261 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 SLC9A5Q14940 896 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 MPPED2Q15777 294 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 SLC25A35Q3KQZ1 300 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ZNF805Q5CZA5 627 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 TXNDC8Q6A555 127 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 HIST2H2BCQ6DN03 193 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 SLC25A25Q6KCM7 469 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 RPL22L1Q6P5R6 122 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 GSG1LQ6UXU4 331 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 TMUB2Q71RG4 321 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 KANSL1Q7Z3B3 1105 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 TMEM150AQ86TG1 271 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 MCATQ8IVS2 390 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 NKAIN4Q8IVV8 208 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 CDH26Q8IXH8 852 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 CMTM8Q8IZV2 173 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 CAMKVQ8NCB2 501 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 CLRN3Q8NCR9 226 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 OR11G2Q8NGC1 345 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 OR2A12Q8NGT7 310 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 COQ8AQ8NI60 647 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 SMAP2Q8WU79 429 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 NSMAFQ92636 917 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 FBXW5Q969U6 566 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 PNPLA2Q96AD5 504 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 DTD2Q96FN9 168 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 S100A16Q96FQ6 103 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 C4orf36Q96KX1 117 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 HSPA12BQ96MM6 686 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 OR7D2Q96RA2 312 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 TBX5Q99593 518 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ACTRT3Q9BYD9 372 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ZDHHC5Q9C0B5 715 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 SLITRK2Q9H156 845 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ABCG4Q9H172 646 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 RSPH9Q9H1X1 276 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 OR10A4Q9H209 315 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 SLC38A1Q9H2H9 487 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 IL21Q9HBE4 155 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 NOX3Q9HBY0 568 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 NRIP3Q9NQ35 241 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 TAS2R10Q9NYW0 307 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 PIPOXQ9P0Z9 390 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 IL36AQ9UHA7 158 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 TAC3Q9UHF0 121 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 CLEC4EQ9ULY5 219 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 RCE1Q9Y256 329 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 SLC35A3Q9Y2D2 325 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 PCDHGA9Q9Y5G4 932 aaKnown RBP7.16□□□□□ -1.26
CPSF7-216ENST00000536548 CELSR2Q9HCU4 2923 aa7.16□□□□□ -1.26
CPSF7-216ENST00000536548 KNL1Q8NG31 2342 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 A0A1B0GVC2 190 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 ANKRD20A5PA0PJZ0 165 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 TRAPPC13A5PLN9 417 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 CDHR4A6H8M9 788 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 A6NIN4 97 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 F5H5P2 479 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 BHLHE40O14503 412 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 PIP5K1CO60331 668 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 SDC3O75056 442 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 LEFTY1O75610 366 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 NDUFB6O95139 128 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms