RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 FAM91A1Q658Y4 838 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 C8orf82Q6P1X6 216 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-206ENST00000536429 ULK3Q6PHR2 472 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 RANBP3LQ86VV4 465 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-206ENST00000536429 EPHX4Q8IUS5 362 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 SLC15A3Q8IY34 581 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 UBE2J2Q8N2K1 259 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 ZNF433Q8N7K0 673 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-206ENST00000536429 SLC47A1Q96FL8 570 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 HDHD5Q9BXW7 423 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 OR10A4Q9H209 315 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 FANCFQ9NPI8 374 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 SLC7A10Q9NS82 523 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 B3GAT1Q9P2W7 334 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 SLC9A8Q9Y2E8 581 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 PRRC2AP48634 2157 aaKnown RBP11.61□□□□□ -0.55
PRKDC-206ENST00000536429 TRAV36DV7A0A075B6V5 113 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 M0R082 166 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 PDLIM1O00151 329 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 FMO6PO60774 539 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 SHOX2O60902 331 aaPredicted RBP11.6□□□□□ -0.55
PRKDC-206ENST00000536429 ITGA5P08648 1049 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 GRPRP30550 384 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 SELENOPP49908 381 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 SLC7A2P52569 658 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 ART1P52961 327 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 VEZF1Q14119 521 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 STK11Q15831 433 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 BEX5Q5H9J7 111 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 TMEM225Q6GV28 225 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 CREB3L2Q70SY1 520 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 OR2T12Q8NG77 320 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 ZNF417Q8TAU3 575 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 SLC26A7Q8TE54 656 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 NINJ1Q92982 152 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 TMEM45BQ96B21 275 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 PLPPR2Q96GM1 343 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 MOGAT1Q96PD6 335 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 ZNF587Q96SQ5 575 aaPredicted RBP11.6□□□□□ -0.55
PRKDC-206ENST00000536429 SF3B5Q9BWJ5 86 aaKnown RBP11.6□□□□□ -0.55
PRKDC-206ENST00000536429 MALT1Q9UDY8 824 aa11.6□□□□□ -0.55
PRKDC-206ENST00000536429 A0A1W2PR80 420 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 NME4O00746 187 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 RAD51DO75771 328 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 CNOT4O95628 575 aaKnown RBP11.59□□□□□ -0.55
PRKDC-206ENST00000536429 HPRP00739 348 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 BGLAPP02818 100 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 CD53P19397 219 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 DNASE1P24855 282 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 OR1E2P47887 323 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 NUDT2P50583 147 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 LIPEQ05469 1076 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 LRRC23Q53EV4 343 aaPredicted RBP11.59□□□□□ -0.55
PRKDC-206ENST00000536429 CYBRD1Q53TN4 286 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 FAM69AQ5T7M9 428 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 ERICH5Q6P6B1 374 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 ZNF613Q6PF04 617 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 LINC00114Q6XXX2 140 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 LINGO2Q7L985 606 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 AAED1Q7RTV5 226 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 CPLX4Q7Z7G2 160 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 CARM1Q86X55 608 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 WDFY1Q8IWB7 410 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 MICU2Q8IYU8 434 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 ADAMTS16Q8TE57 1224 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 EVA1AQ9H8M9 152 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 UBTD1Q9HAC8 227 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 ASB6Q9NWX5 421 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 NPAP1Q9NZP6 1156 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 SELENONQ9NZV5 590 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 RASD1Q9Y272 281 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 SH3GLB1Q9Y371 365 aa11.59□□□□□ -0.55
PRKDC-206ENST00000536429 ELOVL7A1L3X0 281 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 DYNC1I1O14576 645 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 CHP2O43745 196 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 OR2T1O43869 369 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 RAF1P04049 648 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 HLA-DOBP13765 273 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 GGT1P19440 569 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 FUT4P22083 530 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 KDELR2P33947 212 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 KEAP1Q14145 624 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 SWT1Q5T5J6 900 aaKnown RBP11.58□□□□□ -0.56
PRKDC-206ENST00000536429 NIPAL3Q6P499 406 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 ZNF704Q6ZNC4 412 aaPredicted RBP11.58□□□□□ -0.56
PRKDC-206ENST00000536429 PIGWQ7Z7B1 504 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 HSD17B8Q92506 261 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 PROX1Q92786 737 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 NEUROG1Q92886 237 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 PRSS27Q9BQR3 290 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 TMEM204Q9BSN7 226 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 TMEM43Q9BTV4 400 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 NSRP1Q9H0G5 558 aaKnown RBP11.58□□□□□ -0.56
PRKDC-206ENST00000536429 PCDHAC1Q9H158 963 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 EFCAB1Q9HAE3 211 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 PARPBPQ9NWS1 579 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 TAS2R16Q9NYV7 291 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 SLC7A7Q9UM01 511 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 CADP27708 2225 aa11.58□□□□□ -0.56
PRKDC-206ENST00000536429 ITPR3Q14573 2671 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms