RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 CHRNB3Q05901 458 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 SLC17A1Q14916 467 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 PDK3Q15120 406 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 SEC23BQ15437 767 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 GTF2IRD2BQ6EKJ0 949 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 PODNL1Q6PEZ8 512 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 FAM214BQ7L5A3 538 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 NUFIP2Q7Z417 695 aaKnown RBP11.68□□□□□ -0.54
TMEM258-202ENST00000535042 GTF2IRD2Q86UP8 949 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 MEX3DQ86XN8 651 aaKnown RBP11.68□□□□□ -0.54
TMEM258-202ENST00000535042 C10orf53Q8N6V4 93 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 OR52J3Q8NH60 311 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 PIGXQ8TBF5 258 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 SLC7A13Q8TCU3 470 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 CA5BP1Q8WTZ4 195 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 ACOT11Q8WXI4 607 aaPredicted RBP11.68□□□□□ -0.54
TMEM258-202ENST00000535042 SLCO4A1Q96BD0 722 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 BCO1Q9HAY6 547 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 GLRX2Q9NS18 164 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 KLHL9Q9P2J3 617 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 MED31Q9Y3C7 131 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 ARHGAP21Q5T5U3 1957 aa11.68□□□□□ -0.54
TMEM258-202ENST00000535042 TENM4Q6N022 2769 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 IGKV3D-15A0A087WSY6 115 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 A0A1W2PRQ8 180 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 DHRS12A0PJE2 317 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 A1L4Q6 167 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 DVL2O14641 736 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 HPRP00739 348 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 YES1P07947 543 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 EDNRAP25101 427 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 RRM2P31350 389 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 SLC16A1P53985 500 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 CTBP2P56545 445 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 SPIBQ01892 262 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 CCNIQ14094 377 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 DGCR6Q14129 220 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 FAM98BQ52LJ0 330 aaKnown RBP11.67□□□□□ -0.54
TMEM258-202ENST00000535042 C1orf146Q5VVC0 180 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 H1FNTQ75WM6 255 aaPredicted RBP11.67□□□□□ -0.54
TMEM258-202ENST00000535042 YTHDF3Q7Z739 585 aaKnown RBP11.67□□□□□ -0.54
TMEM258-202ENST00000535042 NRMQ8IXM6 262 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 ZIC4Q8N9L1 334 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 SGTBQ96EQ0 304 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 DOCK7Q96N67 2140 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 PSMG3-AS1Q96PY0 264 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 ZNF347Q96SE7 839 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 CHID1Q9BWS9 393 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 OPN3Q9H1Y3 402 aaPredicted RBP11.67□□□□□ -0.54
TMEM258-202ENST00000535042 ANKRD19PQ9H560 264 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 GP6Q9HCN6 339 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 CHST11Q9NPF2 352 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 VNN3Q9NY84 501 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 MRPL39Q9NYK5 338 aaKnown RBP11.67□□□□□ -0.54
TMEM258-202ENST00000535042 JKAMPQ9P055 326 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 B3GAT1Q9P2W7 334 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 AURKCQ9UQB9 309 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 FLNCQ14315 2725 aa11.67□□□□□ -0.54
TMEM258-202ENST00000535042 DIDO1Q9BTC0 2240 aaKnown RBP11.67□□□□□ -0.54
TMEM258-202ENST00000535042 ZNF724A8MTY0 619 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 MS4A18H0YCH9 400 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 C19orf84I3L1E1 186 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 PLPP3O14495 311 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 OR7A10O76100 309 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 GADD45GO95257 159 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 MT-ATP6P00846 226 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 IGF2P01344 180 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 ASAH2BP0C7U1 165 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 RAP2AP10114 183 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 UMPSP11172 480 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 IFI30P13284 250 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 FUT1P19526 365 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 MAKP20794 623 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 GRNP28799 593 aaKnown RBP11.66□□□□□ -0.54
TMEM258-202ENST00000535042 GTF2E2P29084 291 aaKnown RBP11.66□□□□□ -0.54
TMEM258-202ENST00000535042 PRKCDQ05655 676 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 TFF3Q07654 80 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 PPP1R8Q12972 351 aaKnown RBP11.66□□□□□ -0.54
TMEM258-202ENST00000535042 MFSD13AQ14CX5 517 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 MS4A18Q3C1V0 323 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 SLC25A35Q3KQZ1 300 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 FGD3Q5JSP0 725 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 TMEM201Q5SNT2 666 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 TMEM225Q6GV28 225 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 ZNF730Q6ZMV8 503 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 MBOAT2Q6ZWT7 520 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.66□□□□□ -0.54
TMEM258-202ENST00000535042 MAMDC2Q7Z304 686 aaPredicted RBP11.66□□□□□ -0.54
TMEM258-202ENST00000535042 EPHX4Q8IUS5 362 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 SCAIQ8N9R8 606 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 ZNF610Q8N9Z0 462 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 PAPD5Q8NDF8 572 aaKnown RBP11.66□□□□□ -0.54
TMEM258-202ENST00000535042 OR9K2Q8NGE7 335 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 OR6K3Q8NGY3 331 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 POP5Q969H6 163 aaKnown RBP11.66□□□□□ -0.54
TMEM258-202ENST00000535042 ZNF385AQ96PM9 386 aaKnown RBP11.66□□□□□ -0.54
TMEM258-202ENST00000535042 SF3B5Q9BWJ5 86 aaKnown RBP11.66□□□□□ -0.54
TMEM258-202ENST00000535042 ASPNQ9BXN1 380 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 KLHL4Q9C0H6 718 aa11.66□□□□□ -0.54
TMEM258-202ENST00000535042 C12orf49Q9H741 205 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms