RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 ACBD4Q8NC06 268 aa12.44□□□□□ -0.42
VPS11-205ENST00000534551 MFSD8Q8NHS3 518 aa12.44□□□□□ -0.42
VPS11-205ENST00000534551 TMEM43Q9BTV4 400 aa12.44□□□□□ -0.42
VPS11-205ENST00000534551 GORASP2Q9H8Y8 452 aa12.44□□□□□ -0.42
VPS11-205ENST00000534551 GLRX2Q9NS18 164 aa12.44□□□□□ -0.42
VPS11-205ENST00000534551 C6orf203Q9P0P8 240 aaPredicted RBP12.44□□□□□ -0.42
VPS11-205ENST00000534551 B3GAT1Q9P2W7 334 aa12.44□□□□□ -0.42
VPS11-205ENST00000534551 RPS6KA6Q9UK32 745 aa12.44□□□□□ -0.42
VPS11-205ENST00000534551 PRPF19Q9UMS4 504 aaKnown RBP12.44□□□□□ -0.42
VPS11-205ENST00000534551 FLVCR1Q9Y5Y0 555 aa12.44□□□□□ -0.42
VPS11-205ENST00000534551 ANKHD1Q8IWZ3 2542 aaKnown RBP12.44□□□□□ -0.42
VPS11-205ENST00000534551 HRNRQ86YZ3 2850 aaPredicted RBP12.44□□□□□ -0.42
VPS11-205ENST00000534551 IGKV3D-15A0A087WSY6 115 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 TCRBV5S2A0A599 114 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 GYG2O15488 501 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 GMNNO75496 209 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 CH25HO95992 272 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 YES1P07947 543 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 PRF1P14222 555 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 COX6B1P14854 86 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 FKBP2P26885 142 aaKnown RBP12.43□□□□□ -0.42
VPS11-205ENST00000534551 ERFP50548 548 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 SLC16A1P53985 500 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 LGALS3BPQ08380 585 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 SLC17A1Q14916 467 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 TTC33Q6PID6 262 aaPredicted RBP12.43□□□□□ -0.42
VPS11-205ENST00000534551 CASP12Q6UXS9 341 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 SLC46A3Q7Z3Q1 461 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 WDFY1Q8IWB7 410 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 DMRTC2Q8IXT2 367 aaPredicted RBP12.43□□□□□ -0.42
VPS11-205ENST00000534551 OR9K2Q8NGE7 335 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 LINC01560Q8TB33 94 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 MARVELD3Q96A59 401 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 NAA11Q9BSU3 229 aaPredicted RBP12.43□□□□□ -0.42
VPS11-205ENST00000534551 ENKD1Q9H0I2 346 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 C1orf21Q9H246 121 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 CHST11Q9NPF2 352 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 NDUFAF4Q9P032 175 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 SAMD4AQ9UPU9 718 aaKnown RBP12.43□□□□□ -0.42
VPS11-205ENST00000534551 ENPP4Q9Y6X5 453 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 ALPK2Q86TB3 2170 aa12.43□□□□□ -0.42
VPS11-205ENST00000534551 ZNF724A8MTY0 619 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 EIF1BO60739 113 aaKnown RBP12.42□□□□□ -0.42
VPS11-205ENST00000534551 SERPINI2O75830 405 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 HLA-DOBP13765 273 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 POU2F1P14859 743 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 OR3A2P47893 321 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 FOXG1P55316 489 aaPredicted RBP12.42□□□□□ -0.42
VPS11-205ENST00000534551 IL1RL1Q01638 556 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 ZNF74Q16587 644 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 IQCCQ4KMZ1 466 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 DNAL1Q4LDG9 190 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 EEF1A1P5Q5VTE0 462 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 ANKRD34AQ69YU3 496 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 GTF2IRD2BQ6EKJ0 949 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 LCN8Q6JVE9 175 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 GALNT5Q7Z7M9 940 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 GTF2IRD2Q86UP8 949 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 ZIC4Q8N9L1 334 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 TMEM239Q8WW34 195 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 PYURFQ96I23 114 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 C7orf34Q96L11 122 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 EPYCQ99645 322 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 PLSCR4Q9NRQ2 329 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 CRIM1Q9NZV1 1036 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 EMC3Q9P0I2 261 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 ACTR3BQ9P1U1 418 aa12.42□□□□□ -0.42
VPS11-205ENST00000534551 NOSIPQ9Y314 301 aaKnown RBP12.42□□□□□ -0.42
VPS11-205ENST00000534551 NQO1P15559 274 aaKnown RBP12.41□□□□□ -0.42
VPS11-205ENST00000534551 CD79BP40259 229 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 PDK3Q15120 406 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 TBPL2Q6SJ96 375 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 C5orf46Q6UWT4 87 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 C22orf34Q6ZV56 151 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 CXorf67Q86X51 503 aaPredicted RBP12.41□□□□□ -0.42
VPS11-205ENST00000534551 EPHX4Q8IUS5 362 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 GABRG1Q8N1C3 465 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 MPP4Q96JB8 637 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 SEPHS2Q99611 448 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 BTBD10Q9BSF8 475 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 FNDC11Q9BVV2 318 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 CADM1Q9BY67 442 aaKnown RBP12.41□□□□□ -0.42
VPS11-205ENST00000534551 KLHL4Q9C0H6 718 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 POLR2J2Q9GZM3 115 aaKnown RBP12.41□□□□□ -0.42
VPS11-205ENST00000534551 POLR2J3Q9H1A7 115 aaKnown RBP12.41□□□□□ -0.42
VPS11-205ENST00000534551 GP6Q9HCN6 339 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 PRDM4Q9UKN5 801 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 TESMINQ9Y4I5 508 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 UNC79Q9P2D8 2635 aa12.41□□□□□ -0.42
VPS11-205ENST00000534551 CENPEQ02224 2701 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 TRBV4-1A0A0J9YWV2 114 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 C11orf98E9PRG8 122 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 ACOT8O14734 319 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 TRAF3IP2O43734 574 aaPredicted RBP12.4□□□□□ -0.42
VPS11-205ENST00000534551 UMPSP11172 480 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 UGT2B10P36537 528 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 SELENOPP49908 381 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 ST3GAL3Q11203 375 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 TRIM25Q14258 630 aaKnown RBP12.4□□□□□ -0.42
VPS11-205ENST00000534551 SEC23BQ15437 767 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms