RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MUS81Q96NY9 551 aa26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 SELENONQ9NZV5 590 aa26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 ARHGEF9O43307 516 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 OR2T1O43869 369 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 OPN1SWP03999 348 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 GTF2E2P29084 291 aaKnown RBP26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 PCGF2P35227 344 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 GZMMP51124 257 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 MAPRE2Q15555 327 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 DUSP7Q16829 419 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 MMEL1Q495T6 779 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 CREB3L2Q70SY1 520 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 P3H2Q8IVL5 708 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 IGFBPL1Q8WX77 278 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 TAAR8Q969N4 342 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 NPAP1Q9NZP6 1156 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 KLHL14Q9P2G3 628 aa26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 FLNAP21333 2647 aaKnown RBP26.65■■□□□ 1.86
SSSCA1-207ENST00000533115 ACANP16112 2415 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 IGKV1D-42A0A075B6H8 117 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 A0A0B4J2E0 115 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 A0A1B0GX12 115 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 BBIP1A8MTZ0 92 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 FZD7O75084 574 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 LGI1O95970 557 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 C8BP07358 591 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 FAM69AQ5T7M9 428 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 C9orf135Q5VTT2 229 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 REP15Q6BDI9 236 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 PATL1Q86TB9 770 aaKnown RBP26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 POMGNT2Q8NAT1 580 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 OR52N5Q8NH56 324 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 RNF217Q8TC41 542 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 LRRC58Q96CX6 371 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 ARHGDIGQ99819 225 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 SH3GL1Q99961 368 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 SLCO5A1Q9H2Y9 848 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 SLC25A15Q9Y619 301 aa26.64■■□□□ 1.86
SSSCA1-207ENST00000533115 ARID1AO14497 2285 aa26.64■■□□□ 1.85
SSSCA1-207ENST00000533115 TRAV36DV7A0A075B6V5 113 aa26.63■■□□□ 1.85
SSSCA1-207ENST00000533115 A0A087WUJ7 227 aa26.63■■□□□ 1.85
SSSCA1-207ENST00000533115 NPPAP01160 153 aa26.63■■□□□ 1.85
SSSCA1-207ENST00000533115 INTS11Q5TA45 600 aaKnown RBP26.63■■□□□ 1.85
SSSCA1-207ENST00000533115 EPHX4Q8IUS5 362 aa26.63■■□□□ 1.85
SSSCA1-207ENST00000533115 GPR32P1Q8NGA4 272 aa26.63■■□□□ 1.85
SSSCA1-207ENST00000533115 TMEM171Q8WVE6 324 aa26.63■■□□□ 1.85
SSSCA1-207ENST00000533115 AMBRA1Q9C0C7 1298 aa26.63■■□□□ 1.85
SSSCA1-207ENST00000533115 M0R3H8 397 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 FXYD1O00168 92 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 MRASO14807 208 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 MPGP29372 298 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 MDH1P40925 334 aaKnown RBP26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 TGFBR3Q03167 851 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 NRF1Q16656 503 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 VMACQ2NL98 169 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 ZNF672Q499Z4 452 aaPredicted RBP26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 RABL3Q5HYI8 236 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 Q5PR19 223 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 SNX32Q86XE0 403 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 KDM8Q8N371 416 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 C1orf162Q8NEQ5 155 aaPredicted RBP26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 KBTBD8Q8NFY9 601 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 OR8J3Q8NGG0 315 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 NEUROG1Q92886 237 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 FBXW5Q969U6 566 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 DLL4Q9NR61 685 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 SEC14L4Q9UDX3 406 aa26.62■■□□□ 1.85
SSSCA1-207ENST00000533115 CADP27708 2225 aa26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 LOC100653049A0A140TA62 436 aa26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 A0A1W2PR80 420 aa26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 AIM2O14862 343 aa26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 FMO6PO60774 539 aa26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 TMCC2O75069 709 aa26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 KRT34O76011 436 aa26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 CDH12P55289 794 aa26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 SWT1Q5T5J6 900 aaKnown RBP26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 PERPQ96FX8 193 aa26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 MCHR1Q99705 422 aa26.61■■□□□ 1.85
SSSCA1-207ENST00000533115 M0R082 166 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 GRPRP30550 384 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 SELENOPP49908 381 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 NIPAL3Q6P499 406 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 ABHD12BQ7Z5M8 362 aaPredicted RBP26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 CALHM3Q86XJ0 350 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 C17orf78Q8N4C9 275 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 OR6T1Q8NGN1 323 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 OR6S1Q8NH40 331 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 ZNF417Q8TAU3 575 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 SLC26A7Q8TE54 656 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 C10orf82Q8WW14 230 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 TAMM41Q96BW9 452 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 ZNF587Q96SQ5 575 aaPredicted RBP26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 EPYCQ99645 322 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 ECSITQ9BQ95 431 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 GSX2Q9BZM3 304 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 CXorf56Q9H5V9 222 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 B3GALT5Q9Y2C3 310 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 CAPN7Q9Y6W3 813 aa26.6■■□□□ 1.85
SSSCA1-207ENST00000533115 OR6C65A6NJZ3 312 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 KRT33AO76009 404 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms