RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 C1orf140Q5VVS0 124 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 PRAMEF8Q5VWM4 474 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 PRAMEF7Q5VXH5 474 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 CYB5R2Q6BCY4 276 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 NXNQ6DKJ4 435 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 NIPAL3Q6P499 406 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 ABHD12BQ7Z5M8 362 aaPredicted RBP14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 SERPINA11Q86U17 422 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 EPHX4Q8IUS5 362 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 ANKS4BQ8N8V4 417 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 GLB1L3Q8NCI6 653 aaPredicted RBP14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 VPS33AQ96AX1 596 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 C3orf49Q96BT1 292 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 TMEM19Q96HH6 336 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 BOD1Q96IK1 185 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 SLC38A2Q96QD8 506 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 BEX2Q9BXY8 128 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 PARD6BQ9BYG5 372 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 PIF1Q9H611 641 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 SEC61A2Q9H9S3 476 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 TMEM45AQ9NWC5 275 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 TMEM160Q9NX00 188 aa14.88□□□□□ -0.03
RPUSD4-207ENST00000532800 A0A096LPE4 126 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 A0A1W2PPZ6 126 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 VWC2LB2RUY7 222 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 ZNF587BE7ETH6 402 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 NPIPB7O75200 414 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 SNNO75324 88 aaPredicted RBP14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 NCF2P19878 526 aaPredicted RBP14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 PDLIM4P50479 330 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 COPZ1P61923 177 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 HOXC5Q00444 222 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 C1QTNF12Q5T7M4 302 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 IL17RELQ6ZVW7 336 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 MAVSQ7Z434 540 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 KDM8Q8N371 416 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 OR9I1Q8NGQ6 314 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 MGARPQ8TDB4 240 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 BCL2L2Q92843 193 aaPredicted RBP14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 NELFAQ9H3P2 528 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 TPT1P8Q9HAU6 139 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 OBP2BQ9NPH6 170 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 CA10Q9NS85 328 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 CALML5Q9NZT1 146 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 SEC14L4Q9UDX3 406 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 FKBP7Q9Y680 259 aa14.87□□□□□ -0.03
RPUSD4-207ENST00000532800 SLC35F4A4IF30 521 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 TRPC5OSA6NMA1 111 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 FTCDNL1E5RQL4 147 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 LMX1BO60663 402 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 SLC22A3O75751 556 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 ANP32DO95626 131 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 IL6P05231 212 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 CECR9P0C854 216 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 IDO1P14902 403 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 IGFBP5P24593 272 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 CALCRP30988 508 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 NR4A2P43354 598 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 UBE2NP61088 152 aaKnown RBP14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 SNRPD2P62316 118 aaKnown RBP14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 LARS2Q15031 903 aaKnown RBP14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 CARTPTQ16568 116 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 SLC9B1Q4ZJI4 515 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 ATG16L1Q676U5 607 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 VHLLQ6RSH7 139 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 SLC25A36Q96CQ1 311 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 VRK1Q99986 396 aaPredicted RBP14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 KCNS3Q9BQ31 491 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 KATNB1Q9BVA0 655 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 PTDSS2Q9BVG9 487 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 PRR14Q9BWN1 585 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 SPATA9Q9BWV2 254 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 SHARPINQ9H0F6 387 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 CHODLQ9H9P2 273 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 THAP1Q9NVV9 213 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 RASD1Q9Y272 281 aa14.86□□□□□ -0.03
RPUSD4-207ENST00000532800 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.85□□□□□ -0.034e-6■■■■□ 20.7
RPUSD4-207ENST00000532800 ARPC4-TTLL3A0A0A6YYG9 625 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 IGHV4-61A0A0C4DH41 118 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 TMEM120BA0PK00 339 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 VAMP5O95183 116 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 AHSA1O95433 338 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 CRYAAP02489 173 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 CELA3BP08861 270 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 NUDT7P0C024 238 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 ZCCHC18P0CG32 403 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 PNMTP11086 282 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 SERPINF1P36955 418 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 RPS5P46782 204 aaKnown RBP14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 SRSF2Q01130 221 aaKnown RBP14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 ROR2Q01974 943 aaKnown RBP14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 NAAAQ02083 359 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 EGR4Q05215 589 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 ADIPOQQ15848 244 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 KRTAP24-1Q3LI83 254 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 SLC46A3Q7Z3Q1 461 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 MYPOPQ86VE0 399 aaPredicted RBP14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 STK35Q8TDR2 534 aa14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 MAELQ96JY0 434 aaKnown RBP14.85□□□□□ -0.03
RPUSD4-207ENST00000532800 FOXN4Q96NZ1 517 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms