RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 GIPRP48546 466 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 EPHA4P54764 986 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 RGNQ15493 299 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PLA1AQ53H76 456 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 AADACL4Q5VUY2 407 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PSAPL1Q6NUJ1 521 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM92Q6UXU6 159 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 GID4Q8IVV7 300 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 FAM71CQ8NEG0 241 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 OR4K5Q8NGD3 323 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC7A13Q8TCU3 470 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 OSTF1Q92882 214 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 FOXJ1Q92949 421 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 ARRDC3Q96B67 414 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 IMP4Q96G21 291 aaKnown RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PPP1R3EQ9H7J1 279 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 CRLF2Q9HC73 371 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 NDOR1Q9UHB4 597 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 LDB2O43679 373 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 MED6O75586 246 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PDYNP01213 254 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 BPIP17213 487 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 C5AR1P21730 350 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 EDNRAP25101 427 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 RGS8P57771 180 aaPredicted RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 S100A10P60903 97 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PKIAP61925 76 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 RELQ04864 619 aaPredicted RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PLA2G7Q13093 441 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 MANEALQ5VSG8 457 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 C1orf94Q6P1W5 598 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 CEACAM20Q6UY09 585 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 BCDIN3DQ7Z5W3 292 aaKnown RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PRSS58Q8IYP2 241 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 CPXM2Q8N436 756 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 STEAP2Q8NFT2 490 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 GAL3ST4Q96RP7 486 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 RSRP1Q9BUV0 290 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 CST11Q9H112 138 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 ALX4Q9H161 411 aaPredicted RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 C6orf106Q9H6K1 298 aaPredicted RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 AK6Q9Y3D8 172 aaKnown RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 ADAM18Q9Y3Q7 739 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 RBBP6Q7Z6E9 1792 aaKnown RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 LOC390937A0A1W2PQ73 354 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 ZAR1LA6NP61 321 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF705FA8MVS1 300 aaPredicted RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 TDRD15B5MCY1 1934 aaKnown RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 K7ESM1 405 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 IGLV3-25P01717 112 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 CATP04040 527 aaKnown RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 THBS1P07996 1170 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF705DP0CH99 300 aaPredicted RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF705BP0CI00 300 aaPredicted RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PET100P0DJ07 73 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 MTHFD2P13995 350 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 FGF7P21781 194 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 CTSCP53634 463 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 YBX1P67809 324 aaKnown RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 CACNG1Q06432 222 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PCBP2Q15366 365 aaKnown RBP eCLIP6.3□□□□□ -1.42e-6■■■■■ 28.2
TGFBR3-209ENST00000532540 ACSM3Q53FZ2 586 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 LAIR1Q6GTX8 287 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PRSS45Q7RTY3 260 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 OR2W3Q7Z3T1 314 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 REC114Q7Z4M0 266 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 SPICQ8N5J4 248 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 MDGA1Q8NFP4 955 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 OR4K1Q8NGD4 311 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 OR1S2Q8NGQ3 325 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 HS6ST2Q96MM7 605 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 PTCHD1Q96NR3 888 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 VPS25Q9BRG1 176 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF700Q9H0M5 742 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 S1PR5Q9H228 398 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 RHBGQ9H310 441 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 ESRP2Q9H6T0 727 aaKnown RBP6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 FN3KRPQ9HA64 309 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 TAS2R5Q9NYW4 299 aa6.3□□□□□ -1.4
TGFBR3-209ENST00000532540 CBY3A6NI87 242 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 J3KTA2 159 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SCAMP2O15127 329 aaKnown RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ATP1B1P05026 303 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 EIF4EP06730 217 aaKnown RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 KLK3P07288 261 aaPredicted RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 HNF1AP20823 631 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 BDKRB2P30411 391 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 CD80P33681 288 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 AHRP35869 848 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 P2RY2P41231 377 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 AKR1C3P42330 323 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 CCR8P51685 355 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 GLO1Q04760 184 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 GUCA2BQ16661 112 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 MINDY4Q4G0A6 757 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 FAM219BQ5XKK7 198 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC25A24Q6NUK1 477 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF705AQ6ZN79 300 aaPredicted RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ABHD13Q7L211 337 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 LDLRAD3Q86YD5 345 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms