RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 GFYI3L273 518 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 CDK1P06493 297 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 CXCR4P61073 352 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 FAM53BQ14153 422 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF750Q32MQ0 723 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 ANKRD13BQ86YJ7 626 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF610Q8N9Z0 462 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 LSM14AQ8ND56 463 aaKnown RBP10.44□□□□□ -0.74
PTPRK-221ENST00000532331 TFAP2CQ92754 450 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF845Q96IR2 970 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-221ENST00000532331 TSPAN10Q9H1Z9 355 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-221ENST00000532331 UBQLN2Q9UHD9 624 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 FKBP2P26885 142 aaKnown RBP10.44□□□□□ -0.74
PTPRK-221ENST00000532331 CXADRP78310 365 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 CCDC58Q4VC31 144 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 PLCXD3Q63HM9 321 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF322Q6U7Q0 402 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-221ENST00000532331 MRGPRX3Q96LB0 322 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 LHX6Q9UPM6 363 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 POLR2AP24928 1970 aaKnown RBP10.44□□□□□ -0.74
PTPRK-221ENST00000532331 PLPP1O14494 284 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 IL7P13232 177 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 PSMB10P40306 273 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 ARF1P84077 181 aaKnown RBP10.44□□□□□ -0.74
PTPRK-221ENST00000532331 ACSM3Q53FZ2 586 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 SPRED2Q7Z698 418 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 TSLPQ969D9 159 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 SLC41A2Q96JW4 573 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 PLEKHJ1Q9NW61 149 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 SPAARA0A1B0GVQ0 90 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 EIF4E2O60573 245 aaKnown RBP10.44□□□□□ -0.74
PTPRK-221ENST00000532331 ADH6P28332 368 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 PCGF3Q3KNV8 242 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 CMIPQ8IY22 773 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 ZFP57Q9NU63 452 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 MYEF2Q9P2K5 600 aaKnown RBP10.44□□□□□ -0.74
PTPRK-221ENST00000532331 DUSP13Q9UII6 198 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 HHLA2Q9UM44 414 aa10.44□□□□□ -0.74
PTPRK-221ENST00000532331 KDM4EB2RXH2 506 aaPredicted RBP10.43□□□□□ -0.74
PTPRK-221ENST00000532331 F13BP05160 661 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 TACR1P25103 407 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 GABRA2P47869 451 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 SELPLGQ14242 412 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 VASNQ6EMK4 673 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 TMEM207Q6UWW9 146 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 WDR5BQ86VZ2 330 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 SLC35F3Q8IY50 421 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 SLC7A13Q8TCU3 470 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 CHTF18Q8WVB6 975 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 ASB17Q8WXJ9 295 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 FOXRED1Q96CU9 486 aaPredicted RBP10.43□□□□□ -0.74
PTPRK-221ENST00000532331 ELP4Q96EB1 424 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 C4orf36Q96KX1 117 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF285Q96NJ3 590 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 HINT2Q9BX68 163 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 NLKQ9UBE8 527 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 FAM230AA0A1W2PPH8 454 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 SURF4O15260 269 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 NPR2P20594 1047 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 ACVR1Q04771 509 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 TSPAN31Q12999 210 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 PLK5Q496M5 336 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 MFSD12Q6NUT3 480 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 CD300LGQ6UXG3 332 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF813Q6ZN06 617 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 CA13Q8N1Q1 262 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 DUSP15Q9H1R2 295 aaPredicted RBP10.43□□□□□ -0.74
PTPRK-221ENST00000532331 PAQR5Q9NXK6 330 aaPredicted RBP10.43□□□□□ -0.74
PTPRK-221ENST00000532331 CORINQ9Y5Q5 1042 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 ADAMTSL1Q8N6G6 1762 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 FZD6O60353 706 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 TOXO94900 526 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 GYPBP06028 91 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 PGM2L1Q6PCE3 622 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 CMTM1Q8IZ96 169 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 SGCZQ96LD1 299 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 ARL6Q9H0F7 186 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 MAN2C1Q9NTJ4 1040 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 SLAMF8Q9P0V8 285 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 ANKRD31Q8N7Z5 1873 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 ATP6V1G1O75348 118 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 IFNA1P01562 189 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 CHRNB1P11230 501 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 OR4D9Q8NGE8 314 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 TBC1D15Q8TC07 691 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 STACQ99469 402 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 MED18Q9BUE0 208 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 SHANK3Q9BYB0 1731 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 TAF1LQ8IZX4 1826 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 NUDT7P0C024 238 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF691Q5VV52 312 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 TMEM215Q68D42 235 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 OR2T11Q8NH01 316 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 TAS2R3Q9NYW6 316 aa10.43□□□□□ -0.74
PTPRK-221ENST00000532331 VSX1Q9NZR4 365 aaPredicted RBP10.43□□□□□ -0.74
PTPRK-221ENST00000532331 IGHV1OR21-1A0A087WYE8 117 aa10.42□□□□□ -0.74
PTPRK-221ENST00000532331 J3KTA2 159 aa10.42□□□□□ -0.74
PTPRK-221ENST00000532331 ARSBP15848 533 aa10.42□□□□□ -0.74
PTPRK-221ENST00000532331 P2RX1P51575 399 aa10.42□□□□□ -0.74
PTPRK-221ENST00000532331 IHHQ14623 411 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms