RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 TMEM99Q8N816 258 aa13.3□□□□□ -0.28
DEPDC7-204ENST00000532078 ANKRD42Q8N9B4 389 aa13.3□□□□□ -0.28
DEPDC7-204ENST00000532078 ELOA3Q8NG57 546 aa13.3□□□□□ -0.28
DEPDC7-204ENST00000532078 OR52P1PQ8NH57 321 aa13.3□□□□□ -0.28
DEPDC7-204ENST00000532078 FAM168AQ92567 244 aa13.3□□□□□ -0.28
DEPDC7-204ENST00000532078 HTRA1Q92743 480 aa13.3□□□□□ -0.28
DEPDC7-204ENST00000532078 TNFRSF13CQ96RJ3 184 aa13.3□□□□□ -0.28
DEPDC7-204ENST00000532078 TAPBPLQ9BX59 468 aa13.3□□□□□ -0.28
DEPDC7-204ENST00000532078 CACYBPQ9HB71 228 aaKnown RBP13.3□□□□□ -0.28
DEPDC7-204ENST00000532078 RLIMQ9NVW2 624 aa13.3□□□□□ -0.28
DEPDC7-204ENST00000532078 ATP6V1G2-DDX39BF2Z307 99 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 GPRIN2O60269 458 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 KRT33AO76009 404 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 BCHEP06276 602 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 APOBEC3AP31941 199 aaPredicted RBP13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 CRATP43155 626 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 EFNA4P52798 201 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 VLDLRP98155 873 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 LARS2Q15031 903 aaKnown RBP13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 PDCD4Q53EL6 469 aaKnown RBP13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 RNF220Q5VTB9 566 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 NXNQ6DKJ4 435 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 GPAT4Q86UL3 456 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 VRK2Q86Y07 508 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 ZIC4Q8N9L1 334 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 PARD6BQ9BYG5 372 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 ARMC7Q9H6L4 198 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 WDR55Q9H6Y2 383 aaPredicted RBP13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 OBP2BQ9NPH6 170 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 THAP1Q9NVV9 213 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 THUMPD1Q9NXG2 353 aaKnown RBP13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 CDC42EP3Q9UKI2 254 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 ZNF443Q9Y2A4 671 aaPredicted RBP13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 PMF1-BGLAPU3KQ54 211 aa13.29□□□□□ -0.28
DEPDC7-204ENST00000532078 ALPK2Q86TB3 2170 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 A0A096LPI6 279 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 TMEM247A6NEH6 219 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 OR6C65A6NJZ3 312 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 RNF212BA8MTL3 300 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 A8MVM7 634 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 ZNF587BE7ETH6 402 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 SLCO1B7G3V0H7 640 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 FRS3O43559 492 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 SNNO75324 88 aaPredicted RBP13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 SLC22A3O75751 556 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 VAMP5O95183 116 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 ANP32DO95626 131 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 GKN3PP0CG01 181 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 ZCCHC18P0CG32 403 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 ETFAP13804 333 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 CDH2P19022 906 aaPredicted RBP13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 NCF2P19878 526 aaPredicted RBP13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 ACAA2P42765 397 aaKnown RBP13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 MVDP53602 400 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 DSTNP60981 165 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 MAPK11Q15759 364 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 TMEM225Q6GV28 225 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 MSANTD1Q6ZTZ1 278 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 LSRQ86X29 649 aaPredicted RBP13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 C10orf105Q8TEF2 133 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 BOD1Q96IK1 185 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 ZNF385AQ96PM9 386 aaKnown RBP13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 KCNS3Q9BQ31 491 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 RMND5AQ9H871 391 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 MANSC1Q9H8J5 431 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 SLC6A13Q9NSD5 602 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 TMEM45AQ9NWC5 275 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 ADPRHL2Q9NX46 363 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 MOKQ9UQ07 419 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 FKBP7Q9Y680 259 aa13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 HEATR1Q9H583 2144 aaKnown RBP13.28□□□□□ -0.28
DEPDC7-204ENST00000532078 TFPTP0C1Z6 253 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 KITP10721 976 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 PAX7P23759 505 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 BNIP2Q12982 314 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 HIKESHIQ53FT3 197 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 C1orf140Q5VVS0 124 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 PRAMEF8Q5VWM4 474 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 PRAMEF7Q5VXH5 474 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 ATG16L1Q676U5 607 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 SLC38A5Q8WUX1 472 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 PROX1Q92786 737 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 AURKBQ96GD4 344 aaPredicted RBP13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 ITCHQ96J02 903 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 TPT1P8Q9HAU6 139 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 ZIM2Q9NZV7 527 aa13.27□□□□□ -0.29
DEPDC7-204ENST00000532078 A0A0G2JPF8 293 aa13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 TMEM120BA0PK00 339 aa13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 HNRNPCL2B2RXH8 293 aa13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 HNRNPCL3B7ZW38 293 aa13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 HNRNPCL1O60812 293 aaKnown RBP13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 AHSA1O95433 338 aa13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 FAM157CP0CG43 387 aa13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 HNRNPCL4P0DMR1 293 aa13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 CD33P20138 364 aa13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 P2RY4P51582 365 aa13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 SNRPD2P62316 118 aaKnown RBP13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 TBRG1Q3YBR2 411 aa13.26□□□□□ -0.29
DEPDC7-204ENST00000532078 RPS26P11Q5JNZ5 115 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms