RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 FNDC5Q8NAU1 212 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 UTP4Q969X6 686 aaKnown RBP15.13■□□□□ 0.01
PKP3-208ENST00000531857 ZG16BQ96DA0 208 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 SLC35G5Q96KT7 338 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 FOXN4Q96NZ1 517 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 OR51I1Q9H343 314 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 UPB1Q9UBR1 384 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 FLVCR1Q9Y5Y0 555 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 RNF103-CHMP3A0A140T963 221 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 CLDN24A6NM45 220 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 ANKRD28O15084 1053 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 DNPH1O43598 174 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 KIAA0513O60268 411 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 SKAP2O75563 359 aaPredicted RBP15.12■□□□□ 0.01
PKP3-208ENST00000531857 G6PDP11413 515 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 MAD2L1Q13257 205 aaPredicted RBP15.12■□□□□ 0.01
PKP3-208ENST00000531857 HACD2Q6Y1H2 254 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 C17orf78Q8N4C9 275 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 PCYOX1LQ8NBM8 494 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 C1orf162Q8NEQ5 155 aaPredicted RBP15.12■□□□□ 0.01
PKP3-208ENST00000531857 RAB8BQ92930 207 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 PIMREGQ9BSJ6 248 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 SOX7Q9BT81 388 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 TMEM181Q9P2C4 612 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 AMDHD2Q9Y303 409 aa15.12■□□□□ 0.01
PKP3-208ENST00000531857 OR12D1P0DN82 309 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 IMPDH2P12268 514 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 APEHP13798 732 aaKnown RBP15.11■□□□□ 0.01
PKP3-208ENST00000531857 CLK1P49759 484 aaKnown RBP15.11■□□□□ 0.01
PKP3-208ENST00000531857 FUT5Q11128 374 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 CARTPTQ16568 116 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 OR4F3Q6IEY1 312 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 STMN2Q93045 179 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 EXD2Q9NVH0 621 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 TRAPPC4Q9Y296 219 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 SLC35A3Q9Y2D2 325 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 WDR45Q9Y484 360 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 FKBP7Q9Y680 259 aa15.11■□□□□ 0.01
PKP3-208ENST00000531857 TMED7-TICAM2A0A0A6YYA0 188 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 TMEM72A0PK05 275 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 NDUFS8O00217 210 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 AP3D1O14617 1153 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 FKBP6O75344 327 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 TGFAP01135 160 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 CDH2P19022 906 aaPredicted RBP15.1■□□□□ 0.01
PKP3-208ENST00000531857 IDH2P48735 452 aaKnown RBP15.1■□□□□ 0.01
PKP3-208ENST00000531857 PRPS1P60891 318 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 SLC17A1Q14916 467 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 HIKESHIQ53FT3 197 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 AP1ARQ63HQ0 302 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 TNFAIP8L2Q6P589 184 aaPredicted RBP15.1■□□□□ 0.01
PKP3-208ENST00000531857 FRRS1Q6ZNA5 592 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 PGAM4Q8N0Y7 254 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 MIER2Q8N344 545 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 MIPOL1Q8TD10 442 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 XAGE5Q8WWM1 108 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 ROPN1LQ96C74 230 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 TUBGCP3Q96CW5 907 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 THTPAQ9BU02 230 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 SAP130Q9H0E3 1048 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 PARPBPQ9NWS1 579 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 SLC9A8Q9Y2E8 581 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 NDUFAF1Q9Y375 327 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 TMED7Q9Y3B3 224 aa15.1■□□□□ 0.01
PKP3-208ENST00000531857 LOC390937A0A1W2PQ73 354 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 ZC3H12DA2A288 527 aaKnown RBP15.09■□□□□ 0.01
PKP3-208ENST00000531857 PRAMEF27A3QJZ7 478 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 NPPAP01160 153 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 C1QCP02747 245 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 FKBP2P26885 142 aaKnown RBP15.09■□□□□ 0.01
PKP3-208ENST00000531857 MPGP29372 298 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 CLDN8P56748 225 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 SLC35A1P78382 337 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 KCNJ10P78508 379 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 TGFBR3Q03167 851 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 PGM2L1Q6PCE3 622 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 OR4A15Q8NGL6 344 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 CNOT9Q92600 299 aaKnown RBP15.09■□□□□ 0.01
PKP3-208ENST00000531857 C1orf159Q96HA4 380 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 VRK1Q99986 396 aaPredicted RBP15.09■□□□□ 0.01
PKP3-208ENST00000531857 AKTIPQ9H8T0 292 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 RNPEPL1Q9HAU8 725 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 OSGIN1Q9UJX0 560 aa15.09■□□□□ 0.01
PKP3-208ENST00000531857 IGHV1-18A0A0C4DH31 117 aa15.08■□□□□ 0
PKP3-208ENST00000531857 LOC100653049A0A140TA62 436 aa15.08■□□□□ 0
PKP3-208ENST00000531857 RNASET2O00584 256 aaKnown RBP15.08■□□□□ 0
PKP3-208ENST00000531857 KRT34O76011 436 aa15.08■□□□□ 0
PKP3-208ENST00000531857 GUSBP08236 651 aa15.08■□□□□ 0
PKP3-208ENST00000531857 ZNF23P17027 643 aa15.08■□□□□ 0
PKP3-208ENST00000531857 HNF1AP20823 631 aa15.08■□□□□ 0
PKP3-208ENST00000531857 SERPINF1P36955 418 aa15.08■□□□□ 0
PKP3-208ENST00000531857 SNRPD2P62316 118 aaKnown RBP15.08■□□□□ 0
PKP3-208ENST00000531857 CR1LQ2VPA4 569 aa15.08■□□□□ 0
PKP3-208ENST00000531857 MMEL1Q495T6 779 aa15.08■□□□□ 0
PKP3-208ENST00000531857 IQCCQ4KMZ1 466 aa15.08■□□□□ 0
PKP3-208ENST00000531857 PDCD4Q53EL6 469 aaKnown RBP15.08■□□□□ 0
PKP3-208ENST00000531857 ATAD3BQ5T9A4 648 aa15.08■□□□□ 0
PKP3-208ENST00000531857 SLC46A3Q7Z3Q1 461 aa15.08■□□□□ 0
PKP3-208ENST00000531857 ANKRD46Q86W74 232 aa15.08■□□□□ 0
PKP3-208ENST00000531857 SNX32Q86XE0 403 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms