RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 AMDHD2Q9Y303 409 aa11.22□□□□□ -0.61
TM9SF1-211ENST00000531406 LIPT2A6NK58 231 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 BBIP1A8MTZ0 92 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 NR5A2O00482 541 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 HNRNPCL1O60812 293 aaKnown RBP11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 UBOX5O94941 541 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 GSNP06396 782 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 DBIP07108 87 aaKnown RBP11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 NR2F1P10589 423 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 BMP4P12644 408 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 UQCRBP14927 111 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 SLC25A16P16260 332 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 IL7RP16871 459 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 CALB2P22676 271 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 IL12AP29459 219 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 APOBEC3AP31941 199 aaPredicted RBP11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 CDKN2CP42773 168 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 MNAT1P51948 309 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 EFNA4P52798 201 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 VLDLRP98155 873 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 CHRNB3Q05901 458 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 CYLC2Q14093 348 aaPredicted RBP11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 COX20Q5RI15 118 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 OTUD3Q5T2D3 398 aaPredicted RBP11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 MRPL2Q5T653 305 aaKnown RBP11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 C6orf89Q6UWU4 347 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 OR9K2Q8NGE7 335 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 RP9Q8TA86 221 aaKnown RBP11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 NANOS1Q8WY41 292 aaKnown RBP11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 FAM168AQ92567 244 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 TMEM45BQ96B21 275 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 OR52E6Q96RD3 313 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 TAGLN3Q9UI15 199 aa11.21□□□□□ -0.61
TM9SF1-211ENST00000531406 FREM1Q5H8C1 2179 aa11.21□□□□□ -0.62
TM9SF1-211ENST00000531406 ERICH4A6NGS2 130 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 ATP6V1G2-DDX39BF2Z307 99 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 ANGPT2O15123 496 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 ATP5HO75947 161 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 PGRP06401 933 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 GPIP06744 558 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 FAM157CP0CG43 387 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 CXCR1P25024 350 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 MPGP29372 298 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 POLR2JP52435 117 aaKnown RBP11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 PRPS1P60891 318 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 LRRC74AQ0VAA2 488 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 CEACAM7Q14002 265 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 MAPK11Q15759 364 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 HIKESHIQ53FT3 197 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 ZNF771Q7L3S4 317 aaPredicted RBP11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 AAED1Q7RTV5 226 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 SNX32Q86XE0 403 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 PHC2Q8IXK0 858 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 PEX5LQ8IYB4 626 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 ZNF440Q8IYI8 595 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 TMEM99Q8N816 258 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 POMGNT2Q8NAT1 580 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 PNPT1Q8TCS8 783 aaKnown RBP11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 C10orf105Q8TEF2 133 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 TSPEARQ8WU66 669 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 NSL1Q96IY1 281 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 ZNF385AQ96PM9 386 aaKnown RBP11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 KCNK17Q96T54 332 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 SF3B5Q9BWJ5 86 aaKnown RBP11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 RLIMQ9NVW2 624 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 CDC42EP3Q9UKI2 254 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 PRDM4Q9UKN5 801 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 PMF1-BGLAPU3KQ54 211 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 CADP27708 2225 aa11.2□□□□□ -0.62
TM9SF1-211ENST00000531406 CDHR4A6H8M9 788 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 AQP7P3A6NL99 342 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 AKR7A3O95154 331 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 KRT75O95678 551 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 WNT11O96014 354 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 IL6P05231 212 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 GKN3PP0CG01 181 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 COX4I1P13073 169 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 CDH2P19022 906 aaPredicted RBP11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 ACAA2P42765 397 aaKnown RBP11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 RASSF2P50749 326 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 MXRA7P84157 204 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 OR7A5Q15622 319 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 MST1LQ2TV78 715 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 MMEL1Q495T6 779 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 CYB5R2Q6BCY4 276 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 KLHL24Q6TFL4 600 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 VRK2Q86Y07 508 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 TREML1Q86YW5 311 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 OR9I1Q8NGQ6 314 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 OR52P1PQ8NH57 321 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 PROX1Q92786 737 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 SPDL1Q96EA4 605 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 AURKBQ96GD4 344 aaPredicted RBP11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 BOD1Q96IK1 185 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 PIF1Q9H611 641 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 SLC6A13Q9NSD5 602 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 NDE1Q9NXR1 346 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 MOKQ9UQ07 419 aa11.19□□□□□ -0.62
TM9SF1-211ENST00000531406 DSPPQ9NZW4 1301 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms