RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 TMEM45AQ9NWC5 275 aa19.52■□□□□ 0.72
TRAPPC4-210ENST00000531290 RASD1Q9Y272 281 aa19.52■□□□□ 0.72
TRAPPC4-210ENST00000531290 ZANQ9Y493 2812 aa19.52■□□□□ 0.72
TRAPPC4-210ENST00000531290 TLN2Q9Y4G6 2542 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 AHSA1O95433 338 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 NUDT7P0C024 238 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 DSCR9P59020 149 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 CHRNB3Q05901 458 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 FADDQ13158 208 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 C11orf71Q6IPW1 123 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 CLEC2AQ6UVW9 174 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 B3GLCTQ6Y288 498 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 CREB3L2Q70SY1 520 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 BBS10Q8TAM1 723 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 MAL2Q969L2 176 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 C3orf49Q96BT1 292 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 CCDC28BQ9BUN5 200 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 CHST2Q9Y4C5 530 aa19.51■□□□□ 0.71
TRAPPC4-210ENST00000531290 OR6C65A6NJZ3 312 aa19.5■□□□□ 0.71
TRAPPC4-210ENST00000531290 FRS3O43559 492 aa19.5■□□□□ 0.71
TRAPPC4-210ENST00000531290 SLC25A3Q00325 362 aa19.5■□□□□ 0.71
TRAPPC4-210ENST00000531290 MFSD8Q8NHS3 518 aa19.5■□□□□ 0.71
TRAPPC4-210ENST00000531290 SLC35B4Q969S0 331 aa19.5■□□□□ 0.71
TRAPPC4-210ENST00000531290 SLC25A36Q96CQ1 311 aa19.5■□□□□ 0.71
TRAPPC4-210ENST00000531290 RPS6KB2Q9UBS0 482 aa19.5■□□□□ 0.71
TRAPPC4-210ENST00000531290 ZNF587BE7ETH6 402 aa19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 TLX2O43763 284 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 NPIPB7O75200 414 aa19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 GTF2E2P29084 291 aaKnown RBP19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 APOBEC3AP31941 199 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 P2RY4P51582 365 aa19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 HOXC5Q00444 222 aa19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 HIKESHIQ53FT3 197 aa19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 OBP2BQ9NPH6 170 aa19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 YAE1D1Q9NRH1 226 aa19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 PMF1-BGLAPU3KQ54 211 aa19.49■□□□□ 0.71
TRAPPC4-210ENST00000531290 IGHV4-30-2A0A087WSY4 118 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 ELOA3DA6NLF2 546 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 TMEM229AB2RXF0 380 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 CD5LO43866 347 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 BMP2P12643 396 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 ETS2P15036 469 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 SELENOPP49908 381 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 UBE2NP61088 152 aaKnown RBP19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 ELOA3BQ3SY89 546 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 NIPAL3Q6P499 406 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 ELOA3Q8NG57 546 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 HTRA1Q92743 480 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 BOD1Q96IK1 185 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 KCNS3Q9BQ31 491 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 EBF4Q9BQW3 602 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 ZNF446Q9NWS9 450 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 ADAM21Q9UKJ8 722 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 MOKQ9UQ07 419 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 ANK3Q12955 4377 aaKnown RBP19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 CADP27708 2225 aa19.48■□□□□ 0.71
TRAPPC4-210ENST00000531290 H7C417 338 aa19.47■□□□□ 0.71
TRAPPC4-210ENST00000531290 LGI1O95970 557 aa19.47■□□□□ 0.71
TRAPPC4-210ENST00000531290 PAX7P23759 505 aa19.47■□□□□ 0.71
TRAPPC4-210ENST00000531290 RPS5P46782 204 aaKnown RBP19.47■□□□□ 0.71
TRAPPC4-210ENST00000531290 MRPL19P49406 292 aaKnown RBP19.47■□□□□ 0.71
TRAPPC4-210ENST00000531290 KRT73Q86Y46 540 aa19.47■□□□□ 0.71
TRAPPC4-210ENST00000531290 EPHX4Q8IUS5 362 aa19.47■□□□□ 0.71
TRAPPC4-210ENST00000531290 OR10H5Q8NGA6 315 aa19.47■□□□□ 0.71
TRAPPC4-210ENST00000531290 SIKE1Q9BRV8 207 aa19.47■□□□□ 0.71
TRAPPC4-210ENST00000531290 TRIM33Q9UPN9 1127 aa19.47■□□□□ 0.71
TRAPPC4-210ENST00000531290 ATP6V1G2-DDX39BF2Z307 99 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 PNMTP11086 282 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 ZNF43P17038 809 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 PPIBP23284 216 aaKnown RBP19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 PRKAR1BP31321 381 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 LGALS3BPQ08380 585 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 TBRG1Q3YBR2 411 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 GCNT6Q5T4J0 391 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 HMBOX1Q6NT76 420 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 BLOC1S3Q6QNY0 202 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 KDM8Q8N371 416 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 OR1K1Q8NGR3 316 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 NFKBIDQ8NI38 313 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 SPDL1Q96EA4 605 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 KTI12Q96EK9 354 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 ALKBH3Q96Q83 286 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 MDFIQ99750 246 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 SPATA5L1Q9BVQ7 753 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 RABEP2Q9H5N1 569 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 C12orf10Q9HB07 376 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 MED4Q9NPJ6 270 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 CCDC167Q9P0B6 97 aa19.46■□□□□ 0.71
TRAPPC4-210ENST00000531290 FTCDNL1E5RQL4 147 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 NR5A2O00482 541 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 OR2T1O43869 369 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 EDF1O60869 148 aaKnown RBP19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 UPK3AO75631 287 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 EFNA4P52798 201 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 CLDN17P56750 224 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 CDK6Q00534 326 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 EGR4Q05215 589 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 C1DQ13901 141 aaKnown RBP19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 LRIF1Q5T3J3 769 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 REEP3Q6NUK4 255 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms