RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 C3orf49Q96BT1 292 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 PAIP1Q9H074 479 aaKnown RBP14.87□□□□□ -0.03
PKP3-207ENST00000530695 RAD21L1Q9H4I0 556 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 TMBIM4Q9HC24 238 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 TMEM45AQ9NWC5 275 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 PCDHB14Q9Y5E9 798 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 MALRD1Q5VYJ5 2156 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 TMEM229AB2RXF0 380 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 ZNF587BE7ETH6 402 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 ATP6V1G2-DDX39BF2Z307 99 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 H7C417 338 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 CLIC1O00299 241 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 NPIPB7O75200 414 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 ERLIN1O75477 346 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 AHSA1O95433 338 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 NUDT7P0C024 238 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 BMP4P12644 408 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 APOBEC3AP31941 199 aaPredicted RBP14.86□□□□□ -0.03
PKP3-207ENST00000530695 SELENOPP49908 381 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 HOXC5Q00444 222 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 CHRNB3Q05901 458 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 LGALS3BPQ08380 585 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 SLC2A7Q6PXP3 512 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 ZNF525Q8N782 197 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 STK35Q8TDR2 534 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 MAL2Q969L2 176 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 BCL2L10Q9HD36 194 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 A4GALTQ9NPC4 353 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 MOKQ9UQ07 419 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 RASD1Q9Y272 281 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 USH1CQ9Y6N9 552 aa14.86□□□□□ -0.03
PKP3-207ENST00000530695 FBN3Q75N90 2809 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 GPRIN2O60269 458 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 LGI1O95970 557 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 FADDQ13158 208 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 TBRG1Q3YBR2 411 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 NIPAL3Q6P499 406 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 EPGNQ6UW88 154 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 EPHX4Q8IUS5 362 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 OR1K1Q8NGR3 316 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 MFSD8Q8NHS3 518 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 BBS10Q8TAM1 723 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 SLC35B4Q969S0 331 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 SLC25A36Q96CQ1 311 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 BOD1Q96IK1 185 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 ALKBH3Q96Q83 286 aaPredicted RBP14.85□□□□□ -0.03
PKP3-207ENST00000530695 OBP2BQ9NPH6 170 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 PMF1-BGLAPU3KQ54 211 aa14.85□□□□□ -0.03
PKP3-207ENST00000530695 A0A096LNT2 108 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 OR6C65A6NJZ3 312 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 ELOA3DA6NLF2 546 aaPredicted RBP14.84□□□□□ -0.03
PKP3-207ENST00000530695 A8MV72 311 aaPredicted RBP14.84□□□□□ -0.03
PKP3-207ENST00000530695 C5orf58C9J3I9 102 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 FTCDNL1E5RQL4 147 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 BMP2P12643 396 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 SLC25A16P16260 332 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 GTF2E2P29084 291 aaKnown RBP14.84□□□□□ -0.03
PKP3-207ENST00000530695 RPS5P46782 204 aaKnown RBP14.84□□□□□ -0.03
PKP3-207ENST00000530695 STX1BP61266 288 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 ELOA3BQ3SY89 546 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 CXXC5Q7LFL8 322 aaKnown RBP14.84□□□□□ -0.03
PKP3-207ENST00000530695 HIPK1Q86Z02 1210 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 GOLGA6L1Q8N7Z2 621 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 ELOA3Q8NG57 546 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 FAM168AQ92567 244 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 RPS6KB2Q9UBS0 482 aa14.84□□□□□ -0.03
PKP3-207ENST00000530695 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.83□□□□□ -0.035e-6■■■■□ 22.8
PKP3-207ENST00000530695 IGHV1-18A0A0C4DH31 117 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 UPK3AO75631 287 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 PNMTP11086 282 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 HOXB9P17482 250 aaPredicted RBP14.83□□□□□ -0.04
PKP3-207ENST00000530695 EFNA4P52798 201 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 UBE2NP61088 152 aaKnown RBP14.83□□□□□ -0.04
PKP3-207ENST00000530695 EGR4Q05215 589 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 LOXL1Q08397 574 aaPredicted RBP14.83□□□□□ -0.04
PKP3-207ENST00000530695 TMEM249Q2WGJ8 235 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 HMBOX1Q6NT76 420 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 LINGO2Q7L985 606 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 KDM8Q8N371 416 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 FBXO17Q96EF6 278 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 KTI12Q96EK9 354 aaPredicted RBP14.83□□□□□ -0.04
PKP3-207ENST00000530695 SLC38A2Q96QD8 506 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 TNFRSF13CQ96RJ3 184 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 KCNS3Q9BQ31 491 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 PTDSS2Q9BVG9 487 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 TCF7L2Q9NQB0 619 aa14.83□□□□□ -0.04
PKP3-207ENST00000530695 CUBNO60494 3623 aa14.82□□□□□ -0.04
PKP3-207ENST00000530695 A0A096LPE4 126 aa14.82□□□□□ -0.04
PKP3-207ENST00000530695 A0A1W2PPZ6 126 aa14.82□□□□□ -0.04
PKP3-207ENST00000530695 NR5A2O00482 541 aa14.82□□□□□ -0.04
PKP3-207ENST00000530695 POLR3GO15318 223 aaPredicted RBP14.82□□□□□ -0.04
PKP3-207ENST00000530695 LY6HO94772 140 aa14.82□□□□□ -0.04
PKP3-207ENST00000530695 CSF3P09919 207 aa14.82□□□□□ -0.04
PKP3-207ENST00000530695 ETS2P15036 469 aa14.82□□□□□ -0.04
PKP3-207ENST00000530695 H2AFXP16104 143 aaPredicted RBP14.82□□□□□ -0.04
PKP3-207ENST00000530695 ZNF43P17038 809 aa14.82□□□□□ -0.04
PKP3-207ENST00000530695 PAX7P23759 505 aa14.82□□□□□ -0.04
PKP3-207ENST00000530695 MRPL19P49406 292 aaKnown RBP14.82□□□□□ -0.04
PKP3-207ENST00000530695 CLDN17P56750 224 aa14.82□□□□□ -0.04
PKP3-207ENST00000530695 SWI5Q1ZZU3 235 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms