RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 SFXN5Q8TD22 340 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 FUT8Q9BYC5 575 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 NKIRAS2Q9NYR9 191 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 ZNF69Q9UC07 566 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 ATP6V1HQ9UI12 483 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 ZDHHC2Q9UIJ5 367 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 GPR160Q9UJ42 338 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 TMED5Q9Y3A6 229 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 TMED7Q9Y3B3 224 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 NOX1Q9Y5S8 564 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 SAR1BQ9Y6B6 198 aa9.93□□□□□ -0.82
AMBRA1-207ENST00000529553 DSPPQ9NZW4 1301 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 LIPT2A6NK58 231 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 UPK3AO75631 287 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 NCR1O76036 304 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 ZNF35P13682 527 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 SDC1P18827 310 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 CCNA2P20248 432 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 RYKP34925 604 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 RPL3P39023 403 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 MTNR1AP48039 350 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 IDH2P48735 452 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 SELENOPP49908 381 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 MRPS25P82663 173 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 ARF1P84077 181 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 ROR2Q01974 943 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 MVKQ03426 396 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 PCGF3Q3KNV8 242 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 LSM12Q3MHD2 195 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 SPDYE7PQ495Y7 208 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 RHOUQ7L0Q8 258 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 GPAT4Q86UL3 456 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 CMIPQ8IY22 773 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 GSPT2Q8IYD1 628 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 ARFGAP2Q8N6H7 521 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 WFDC12Q8WWY7 111 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 UBE2FQ969M7 185 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 TSSK3Q96PN8 268 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 RBM4BQ9BQ04 359 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 SYT3Q9BQG1 590 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 ZNF350Q9GZX5 532 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 SERHL2Q9H4I8 314 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 GSTO2Q9H4Y5 243 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 DENND2DQ9H6A0 471 aaPredicted RBP9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 POLE3Q9NRF9 147 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 B3GNT2Q9NY97 397 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 BAIAP2L1Q9UHR4 511 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 MID2Q9UJV3 735 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 OSGIN1Q9UJX0 560 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 MKLN1Q9UL63 735 aa9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 UTP11Q9Y3A2 253 aaKnown RBP9.92□□□□□ -0.82
AMBRA1-207ENST00000529553 TMEM72A0PK05 275 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 FAAHO00519 579 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 ZSCAN12O43309 604 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 RAD51CO43502 376 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 ZNF432O94892 652 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 AKR7A3O95154 331 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 UROSP10746 265 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 BCKDHAP12694 445 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 RAD52P43351 418 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 NPRL3Q12980 569 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 CEACAM7Q14002 265 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 MAPK14Q16539 360 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 FXNQ16595 210 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 TRMT5Q32P41 509 aaKnown RBP9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 ARMCX4Q5H9R4 360 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 NIPAL3Q6P499 406 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 ZDHHC24Q6UX98 284 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 MDP1Q86V88 176 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 LRP11Q86VZ4 500 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 HOMEZQ8IX15 550 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 OR4F5Q8NH21 305 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 RAB1CQ92928 201 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 RAB8BQ92930 207 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 CCDC126Q96EE4 140 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 TIMD4Q96H15 378 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 ZNF48Q96MX3 618 aaPredicted RBP9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 ALKBH3Q96Q83 286 aaPredicted RBP9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 TMEM216Q9P0N5 145 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 ZNF180Q9UJW8 692 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 RASD1Q9Y272 281 aa9.91□□□□□ -0.82
AMBRA1-207ENST00000529553 CENPVL1A0A0U1RR11 272 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 ZNF503-AS2A6NEH8 195 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 C17orf100A8MU93 164 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 TRIM49D1C9J1S8 452 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 TRAF3IP2O43734 574 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 CRCPO75575 148 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 FOXH1O75593 365 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 AGR2O95994 175 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 NAT2P11245 290 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 EFNA1P20827 205 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 MATN1P21941 496 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 TACR3P29371 465 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 P2RY4P51582 365 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 SELENOVP59797 346 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 KCNJ10P78508 379 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 SRSF4Q08170 494 aaKnown RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 MAD2L1BPQ15013 274 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 OR7A5Q15622 319 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 GSTA3Q16772 222 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms