RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 OR6K3Q8NGY3 331 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 OR52P1PQ8NH57 321 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 RNF128Q8TEB7 428 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 WDR60Q8WVS4 1066 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 CPNE4Q96A23 557 aaPredicted RBP7.5□□□□□ -1.21
SSBP3-212ENST00000528930 TMEM19Q96HH6 336 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 TSC22D3Q99576 134 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 SIKE1Q9BRV8 207 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 SHARPINQ9H0F6 387 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 IKZF5Q9H5V7 419 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 BCL2L10Q9HD36 194 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 NPHS2Q9NP85 383 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.5□□□□□ -1.21
SSBP3-212ENST00000528930 CTPS2Q9NRF8 586 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 GLRX2Q9NS18 164 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 RLIMQ9NVW2 624 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 THUMPD1Q9NXG2 353 aaKnown RBP7.5□□□□□ -1.21
SSBP3-212ENST00000528930 CALML5Q9NZT1 146 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 DCTN4Q9UJW0 460 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 ING1Q9UK53 422 aaPredicted RBP7.5□□□□□ -1.21
SSBP3-212ENST00000528930 PROCRQ9UNN8 238 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 IGHV3-15A0A0B4J1V0 119 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 A0A0G2JPF8 293 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 CDHR4A6H8M9 788 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 HNRNPCL2B2RXH8 293 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 HNRNPCL3B7ZW38 293 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 FAAHO00519 579 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 PABPC4LP0CB38 370 aaKnown RBP7.49□□□□□ -1.21
SSBP3-212ENST00000528930 GKN3PP0CG01 181 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 HNRNPCL4P0DMR1 293 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 GPX2P18283 190 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 NCF2P19878 526 aaPredicted RBP7.49□□□□□ -1.21
SSBP3-212ENST00000528930 ENPP1P22413 925 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 AGTR1P30556 359 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 CCKARP32238 428 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 CPOXP36551 454 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 ACAA2P42765 397 aaKnown RBP7.49□□□□□ -1.21
SSBP3-212ENST00000528930 IDH2P48735 452 aaKnown RBP7.49□□□□□ -1.21
SSBP3-212ENST00000528930 DIO1P49895 249 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 EPS8Q12929 822 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 VEZF1Q14119 521 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 CLEC12BQ2HXU8 276 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 SYT14P1Q58G82 188 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 RUNDC3AQ59EK9 446 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 PRAMEF8Q5VWM4 474 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 PRAMEF7Q5VXH5 474 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 GTF2IRD2BQ6EKJ0 949 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 TMPPEQ6ZT21 453 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 FCRLAQ7L513 359 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 GRINAQ7Z429 371 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 GTF2IRD2Q86UP8 949 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 TUSC5Q8IXB3 177 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 PEX5LQ8IYB4 626 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 CLIP4Q8N3C7 705 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 DPP10Q8N608 796 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF563Q8TA94 476 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 ABHD3Q8WU67 409 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 MAL2Q969L2 176 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 ARL5BQ96KC2 179 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 DACH2Q96NX9 599 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 WFIKKN1Q96NZ8 548 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 OR5B2Q96R09 309 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 PSD2Q9BQI7 771 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 LRMDAQ9H2I8 198 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 RAD21L1Q9H4I0 556 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 RABEP2Q9H5N1 569 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 RNPEPL1Q9HAU8 725 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 A4GALTQ9NPC4 353 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 TIGARQ9NQ88 270 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 SERINC1Q9NRX5 453 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 ELOVL5Q9NYP7 299 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 OSGIN1Q9UJX0 560 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 EMC9Q9Y3B6 208 aa7.49□□□□□ -1.21
SSBP3-212ENST00000528930 TMED7-TICAM2A0A0A6YYA0 188 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 A0A0G2JND7 137 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 TMEM72A0PK05 275 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 SH3D21A4FU49 640 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 SMAD9O15198 467 aaKnown RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 CYTIPO60759 359 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 PRKD3O94806 890 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 PGM3O95394 542 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 PLGP00747 810 aaPredicted RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 RPSAP08865 295 aaKnown RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 PRG2P13727 222 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 POU2F1P14859 743 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 EPHA1P21709 976 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 TACR3P29371 465 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 SLC7A1P30825 629 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 UGT2B10P36537 528 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 SLC1A3P43003 542 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 HTR3AP46098 478 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 CLK1P49759 484 aaKnown RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 CTBP2P56545 445 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 GNA13Q14344 377 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 RNPS1Q15287 305 aaKnown RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 ADRM1Q16186 407 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 LIN52Q52LA3 116 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 FBLN7Q53RD9 439 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 RNF220Q5VTB9 566 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 METTL21CQ5VZV1 264 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms