RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PRAF2O60831 178 aa16.54■□□□□ 0.24
LTBP3-210ENST00000528516 ECDO95905 644 aaPredicted RBP16.54■□□□□ 0.24
LTBP3-210ENST00000528516 TIMP1P01033 207 aa16.54■□□□□ 0.24
LTBP3-210ENST00000528516 F13BP05160 661 aa16.54■□□□□ 0.24
LTBP3-210ENST00000528516 CD2P06729 351 aa16.54■□□□□ 0.24
LTBP3-210ENST00000528516 RPS27P42677 84 aaKnown RBP16.54■□□□□ 0.24
LTBP3-210ENST00000528516 CEBPGP53567 150 aa16.54■□□□□ 0.24
LTBP3-210ENST00000528516 FXYD6P3P58550 94 aa16.54■□□□□ 0.24
LTBP3-210ENST00000528516 PRICKLE2Q7Z3G6 844 aa16.54■□□□□ 0.24
LTBP3-210ENST00000528516 C12orf45Q8N5I9 185 aaPredicted RBP16.54■□□□□ 0.24
LTBP3-210ENST00000528516 OR2L5Q8NG80 312 aa16.54■□□□□ 0.24
LTBP3-210ENST00000528516 KCTD12Q96CX2 325 aaKnown RBP16.54■□□□□ 0.24
LTBP3-210ENST00000528516 KCND3Q9UK17 655 aa16.54■□□□□ 0.24
LTBP3-210ENST00000528516 SLC6A5Q9Y345 797 aa16.54■□□□□ 0.24
LTBP3-210ENST00000528516 ACOD1A6NK06 481 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 DNASE2O00115 360 aaPredicted RBP16.53■□□□□ 0.24
LTBP3-210ENST00000528516 ZNF35P13682 527 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 TRIM23P36406 574 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 PCBP3P57721 371 aaKnown RBP16.53■□□□□ 0.24
LTBP3-210ENST00000528516 ACSM3Q53FZ2 586 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 HACD4Q5VWC8 232 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 ZNF101Q8IZC7 436 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 OR13C5Q8NGS8 318 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 TMEM239Q8WW34 195 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 FN3KQ9H479 309 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 PRTFDC1Q9NRG1 225 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 PLEKHA6Q9Y2H5 1048 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 POM121BA6NF01 834 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 A8MXK9 166 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 SUSD5O60279 629 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 FAM71E1Q6IPT2 247 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 NRSN1Q8IZ57 195 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 OR4D9Q8NGE8 314 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 BPIFA2Q96DR5 249 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 ELP4Q96EB1 424 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 ZDHHC5Q9C0B5 715 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 IL23AQ9NPF7 189 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 C14orf105Q9NVL8 296 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 EMC3Q9P0I2 261 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 GRHPRQ9UBQ7 328 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 SLC5A10A0PJK1 596 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 HOXB3P14651 431 aaPredicted RBP16.53■□□□□ 0.24
LTBP3-210ENST00000528516 ARFIP1P53367 373 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 CD200R1LQ6Q8B3 271 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 KCTD9Q7L273 389 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 APOOQ9BUR5 198 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 MTHFD2LQ9H903 347 aaPredicted RBP16.53■□□□□ 0.24
LTBP3-210ENST00000528516 CBLCQ9ULV8 474 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 TRPM7Q96QT4 1865 aa16.53■□□□□ 0.24
LTBP3-210ENST00000528516 C5orf51A6NDU8 294 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 OR5K4A6NMS3 321 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 GAPDHSO14556 408 aaPredicted RBP16.52■□□□□ 0.24
LTBP3-210ENST00000528516 KIAA0355O15063 1070 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 TO15178 435 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 TNFP01375 233 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 FOSL1P15407 271 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 MRPL2Q5T653 305 aaKnown RBP16.52■□□□□ 0.24
LTBP3-210ENST00000528516 TMEM215Q68D42 235 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 ARIH2OSQ8N7S6 290 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 AMDHD1Q96NU7 426 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 ZNF471Q9BX82 626 aaPredicted RBP16.52■□□□□ 0.24
LTBP3-210ENST00000528516 MS4A8Q9BY19 250 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 PRSS16Q9NQE7 514 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 IGF2P01344 180 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 NDUFS1P28331 727 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 PDX1P52945 283 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 SORDQ00796 357 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 TRMT12Q53H54 448 aaKnown RBP16.52■□□□□ 0.24
LTBP3-210ENST00000528516 KLHL26Q53HC5 615 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 PAN3Q58A45 887 aaKnown RBP16.52■□□□□ 0.24
LTBP3-210ENST00000528516 TMEM69Q5SWH9 247 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 LCTLQ6UWM7 567 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 SLC16A13Q7RTY0 426 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 OR4D10Q8NGI6 311 aa16.52■□□□□ 0.24
LTBP3-210ENST00000528516 WDR89Q96FK6 387 aaPredicted RBP16.52■□□□□ 0.24
LTBP3-210ENST00000528516 AKAP6Q13023 2319 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 A0A087WUU8 490 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 RAB19A4D1S5 217 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 GIPP09681 153 aaPredicted RBP16.52■□□□□ 0.23
LTBP3-210ENST00000528516 SLC6A9P48067 706 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 KCNJ5P48544 419 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 RAB13P51153 203 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 BEX5Q5H9J7 111 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 LEG1Q6P5S2 330 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 HSD17B13Q7Z5P4 300 aaPredicted RBP16.52■□□□□ 0.23
LTBP3-210ENST00000528516 IL17RCQ8NAC3 791 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 POGLUT1Q8NBL1 392 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 THAP6Q8TBB0 222 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 NIT2Q9NQR4 276 aa16.52■□□□□ 0.23
LTBP3-210ENST00000528516 TRAPPC13A5PLN9 417 aa16.51■□□□□ 0.23
LTBP3-210ENST00000528516 LINC00587B1AMM8 73 aa16.51■□□□□ 0.23
LTBP3-210ENST00000528516 RENP00797 406 aa16.51■□□□□ 0.23
LTBP3-210ENST00000528516 FGF2P09038 288 aa16.51■□□□□ 0.23
LTBP3-210ENST00000528516 NTSR1P30989 418 aa16.51■□□□□ 0.23
LTBP3-210ENST00000528516 FAUP35544 74 aaKnown RBP16.51■□□□□ 0.23
LTBP3-210ENST00000528516 RAB12Q6IQ22 244 aa16.51■□□□□ 0.23
LTBP3-210ENST00000528516 TRIM43Q96BQ3 446 aaPredicted RBP16.51■□□□□ 0.23
LTBP3-210ENST00000528516 PDXPQ96GD0 296 aa16.51■□□□□ 0.23
LTBP3-210ENST00000528516 PRRC1Q96M27 445 aa16.51■□□□□ 0.23
LTBP3-210ENST00000528516 C7orf50Q9BRJ6 194 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms