RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.34■□□□□ 0.85
PKP3-206ENST00000528036 LEF1Q9UJU2 399 aaPredicted RBP20.34■□□□□ 0.85
PKP3-206ENST00000528036 PRR14LQ5THK1 2151 aa20.34■□□□□ 0.85
PKP3-206ENST00000528036 TRBV5-3A0A0A0MS03 114 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 NCALDP61601 193 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 BNIP2Q12982 314 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 PGGHGQ32M88 737 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 SLC22A25Q6T423 547 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 MSRB3Q8IXL7 192 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 ZIC4Q8N9L1 334 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 ANKK1Q8NFD2 765 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 NFKBIDQ8NI38 313 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 SLC38A4Q969I6 547 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 DHRS9Q9BPW9 319 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 TESQ9UGI8 421 aaKnown RBP20.33■□□□□ 0.85
PKP3-206ENST00000528036 POU2F3Q9UKI9 436 aa20.33■□□□□ 0.85
PKP3-206ENST00000528036 NIPBLQ6KC79 2804 aaeCLIP20.32■□□□□ 0.842e-6■■■■□ 19.3
PKP3-206ENST00000528036 FZD7O75084 574 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 BMP4P12644 408 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 HOXB1P14653 301 aaPredicted RBP20.32■□□□□ 0.84
PKP3-206ENST00000528036 ZNF83P51522 516 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 RBBP4Q09028 425 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 CLEC12BQ2HXU8 276 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 PAGE3Q5JUK9 113 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 METTL21CQ5VZV1 264 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 ZNF544Q6NX49 715 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 ULK3Q6PHR2 472 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 CREB3L2Q70SY1 520 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 PIAS4Q8N2W9 510 aaPredicted RBP20.32■□□□□ 0.84
PKP3-206ENST00000528036 HIPK4Q8NE63 616 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 OR6S1Q8NH40 331 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 SLC47A1Q96FL8 570 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 ADAD1Q96M93 576 aaKnown RBP20.32■□□□□ 0.84
PKP3-206ENST00000528036 SMR3AQ99954 134 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 TMEM27Q9HBJ8 222 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 RCE1Q9Y256 329 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 ANGPT4Q9Y264 503 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 B3GALT5Q9Y2C3 310 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 NDUFAF1Q9Y375 327 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 USF3Q68DE3 2245 aa20.32■□□□□ 0.84
PKP3-206ENST00000528036 TRIM64A6NGJ6 449 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 TRIM64BA6NI03 449 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 ZNF587BE7ETH6 402 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 AKAP8O43823 692 aaKnown RBP20.31■□□□□ 0.84
PKP3-206ENST00000528036 LY6G6DO95868 133 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 VIMP08670 466 aaKnown RBP20.31■□□□□ 0.84
PKP3-206ENST00000528036 P2RY4P51582 365 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 SH3BGRP55822 239 aaPredicted RBP20.31■□□□□ 0.84
PKP3-206ENST00000528036 SCARB2Q14108 478 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 FAM69AQ5T7M9 428 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 SLC30A8Q8IWU4 369 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 FBXL14Q8N1E6 418 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 DPP10Q8N608 796 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 NEUROG1Q92886 237 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 HS6ST2Q96MM7 605 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 ZNF385AQ96PM9 386 aaKnown RBP20.31■□□□□ 0.84
PKP3-206ENST00000528036 EPYCQ99645 322 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 LINC00470Q9BZP3 86 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 SLAMF8Q9P0V8 285 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 VPS13CQ709C8 3753 aa20.31■□□□□ 0.84
PKP3-206ENST00000528036 LOC102725191A0A1B0GVB3 256 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 FTCDNL1E5RQL4 147 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 M0R1B8 84 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 AIM2O14862 343 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 ANGPT2O15123 496 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 ZNF43P17038 809 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 ALG10BQ5I7T1 473 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 SWT1Q5T5J6 900 aaKnown RBP20.3■□□□□ 0.84
PKP3-206ENST00000528036 CIARTQ8N365 385 aaPredicted RBP20.3■□□□□ 0.84
PKP3-206ENST00000528036 WDR31Q8NA23 367 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 C11orf65Q8NCR3 313 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 OXGR1Q96P68 337 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 CBLN4Q9NTU7 201 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 CORINQ9Y5Q5 1042 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 CADP27708 2225 aa20.3■□□□□ 0.84
PKP3-206ENST00000528036 TRAV36DV7A0A075B6V5 113 aa20.29■□□□□ 0.84
PKP3-206ENST00000528036 A0A1B0GWA3 101 aa20.29■□□□□ 0.84
PKP3-206ENST00000528036 SMAD7O15105 426 aaKnown RBP20.29■□□□□ 0.84
PKP3-206ENST00000528036 TTKP33981 857 aa20.29■□□□□ 0.84
PKP3-206ENST00000528036 VEZF1Q14119 521 aa20.29■□□□□ 0.84
PKP3-206ENST00000528036 RUNDC3AQ59EK9 446 aa20.29■□□□□ 0.84
PKP3-206ENST00000528036 DLEU7Q6UYE1 221 aa20.29■□□□□ 0.84
PKP3-206ENST00000528036 RANBP3LQ86VV4 465 aaPredicted RBP20.29■□□□□ 0.84
PKP3-206ENST00000528036 ARMC8Q8IUR7 673 aa20.29■□□□□ 0.84
PKP3-206ENST00000528036 ADPRHL1Q8NDY3 354 aa20.29■□□□□ 0.84
PKP3-206ENST00000528036 MAGEE2Q8TD90 523 aaPredicted RBP20.29■□□□□ 0.84
PKP3-206ENST00000528036 SLC25A36Q96CQ1 311 aa20.29■□□□□ 0.84
PKP3-206ENST00000528036 CD8AP01732 235 aa20.28■□□□□ 0.84
PKP3-206ENST00000528036 H2AFXP16104 143 aaPredicted RBP20.28■□□□□ 0.84
PKP3-206ENST00000528036 RPS5P46782 204 aaKnown RBP20.28■□□□□ 0.84
PKP3-206ENST00000528036 RGS8P57771 180 aaPredicted RBP20.28■□□□□ 0.84
PKP3-206ENST00000528036 DSCR9P59020 149 aa20.28■□□□□ 0.84
PKP3-206ENST00000528036 EGR4Q05215 589 aa20.28■□□□□ 0.84
PKP3-206ENST00000528036 C3orf36Q3SXR2 165 aa20.28■□□□□ 0.84
PKP3-206ENST00000528036 H1FNTQ75WM6 255 aaPredicted RBP20.28■□□□□ 0.84
PKP3-206ENST00000528036 DHDDSQ86SQ9 333 aa20.28■□□□□ 0.84
PKP3-206ENST00000528036 EPHX4Q8IUS5 362 aa20.28■□□□□ 0.84
PKP3-206ENST00000528036 MUC15Q8N387 334 aa20.28■□□□□ 0.84
PKP3-206ENST00000528036 CPPED1Q9BRF8 314 aaPredicted RBP20.28■□□□□ 0.84
PKP3-206ENST00000528036 PTDSS2Q9BVG9 487 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms