RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 NTF4P34130 210 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 IDH3AP50213 366 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 PDLIM4P50479 330 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 FABP6P51161 128 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 OR2B6P58173 313 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 SLC17A1Q14916 467 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 LARS2Q15031 903 aaKnown RBP9.23□□□□□ -0.93
CPSF1-203ENST00000527916 RGNQ15493 299 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 CR1LQ2VPA4 569 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 WBP2NLQ6ICG8 309 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 BLOC1S3Q6QNY0 202 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 PAQR6Q6TCH4 344 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 KLHL17Q6TDP4 642 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 ZNF433Q8N7K0 673 aaPredicted RBP9.23□□□□□ -0.93
CPSF1-203ENST00000527916 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.23□□□□□ -0.93
CPSF1-203ENST00000527916 OR9I1Q8NGQ6 314 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 LRRC8CQ8TDW0 803 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 ZFAND2BQ8WV99 257 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 STON2Q8WXE9 905 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 VPS33AQ96AX1 596 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 APH1AQ96BI3 265 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 ZNF775Q96BV0 537 aaPredicted RBP9.23□□□□□ -0.93
CPSF1-203ENST00000527916 C1orf159Q96HA4 380 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 MUS81Q96NY9 551 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 PIMREGQ9BSJ6 248 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 SF3B5Q9BWJ5 86 aaKnown RBP9.23□□□□□ -0.93
CPSF1-203ENST00000527916 SPATA9Q9BWV2 254 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 OR11A1Q9GZK7 315 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 A4GALTQ9NPC4 353 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 TCF7L2Q9NQB0 619 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 RLIMQ9NVW2 624 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 ASB6Q9NWX5 421 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 FKBP7Q9Y680 259 aa9.23□□□□□ -0.93
CPSF1-203ENST00000527916 LYZL6O75951 148 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 BCHEP06276 602 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 GPIP06744 558 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 EGR1P18146 543 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 CCNA2P20248 432 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 CXCR1P25024 350 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 EDNRAP25101 427 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 PTAFRP25105 342 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 NR4A2P43354 598 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 ATP4BP51164 291 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 STX1BP61266 288 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 COPZ1P61923 177 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 GTDC1Q4AE62 458 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 C6orf10Q5SRN2 563 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 LRIF1Q5T3J3 769 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 OR7E24Q6IFN5 339 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 ZNF544Q6NX49 715 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 ZNF836Q6ZNA1 936 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 VRK2Q86Y07 508 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 FUNDC1Q8IVP5 155 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 CCDC103Q8IW40 242 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 CLIP4Q8N3C7 705 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 GOLGA6L1Q8N7Z2 621 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 C3orf49Q96BT1 292 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 AURKBQ96GD4 344 aaPredicted RBP9.22□□□□□ -0.93
CPSF1-203ENST00000527916 TMEM19Q96HH6 336 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 BOD1Q96IK1 185 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 SLCO1B3Q9NPD5 702 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 SLC52A3Q9NQ40 469 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 TAS2R16Q9NYV7 291 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 MALT1Q9UDY8 824 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 ZNF443Q9Y2A4 671 aaPredicted RBP9.22□□□□□ -0.93
CPSF1-203ENST00000527916 SLC9A8Q9Y2E8 581 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 CHST2Q9Y4C5 530 aa9.22□□□□□ -0.93
CPSF1-203ENST00000527916 A0A0A6YYJ9 748 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 ZC3H12DA2A288 527 aaKnown RBP9.21□□□□□ -0.94
CPSF1-203ENST00000527916 LIPT2A6NK58 231 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 A8MVM7 634 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 PDLIM1O00151 329 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 NPIPB7O75200 414 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 GKN3PP0CG01 181 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 ETS2P15036 469 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 PPIBP23284 216 aaKnown RBP9.21□□□□□ -0.94
CPSF1-203ENST00000527916 ACTG1P63261 375 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 IQCCQ4KMZ1 466 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 SLC2A7Q6PXP3 512 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 UBE2J2Q8N2K1 259 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 ZNF540Q8NDQ6 660 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 BBS10Q8TAM1 723 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 STK35Q8TDR2 534 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 TMEM45BQ96B21 275 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 EBF4Q9BQW3 602 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 PRR14Q9BWN1 585 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 VIPAS39Q9H9C1 493 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 CACYBPQ9HB71 228 aaKnown RBP9.21□□□□□ -0.94
CPSF1-203ENST00000527916 CCDC167Q9P0B6 97 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 DCTN4Q9UJW0 460 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 FLVCR1Q9Y5Y0 555 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 ARFGEF3Q5TH69 2177 aa9.21□□□□□ -0.94
CPSF1-203ENST00000527916 LOC390937A0A1W2PQ73 354 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 CIB4A0PJX0 185 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 AQP7P3A6NL99 342 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 HMGB1P1B2RPK0 211 aaPredicted RBP9.2□□□□□ -0.94
CPSF1-203ENST00000527916 VWC2LB2RUY7 222 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 VAMP5O95183 116 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 NUDT7P0C024 238 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 GPX2P18283 190 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms