RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 PIAS4Q8N2W9 510 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-213ENST00000527897 C10orf53Q8N6V4 93 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 ZNF611Q8N823 705 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 LSMEM1Q8N8F7 131 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 VANGL1Q8TAA9 524 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-213ENST00000527897 SLC38A4Q969I6 547 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 TAAR8Q969N4 342 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 FBXW5Q969U6 566 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 TMEM45BQ96B21 275 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 SLC47A1Q96FL8 570 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 PTDSS2Q9BVG9 487 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 SLCO5A1Q9H2Y9 848 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 CXorf56Q9H5V9 222 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 KAT8Q9H7Z6 458 aaKnown RBP13.67□□□□□ -0.22
CAPN1-213ENST00000527897 NPAP1Q9NZP6 1156 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 RASD1Q9Y272 281 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 CADP27708 2225 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 LOC100653049A0A140TA62 436 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 M0R082 166 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 M0R1B8 84 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 ABCD4O14678 606 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 KRT34O76011 436 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 VAMP5O95183 116 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 SELENOPP49908 381 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 P2RY4P51582 365 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 PCBP3P57721 371 aaKnown RBP13.66□□□□□ -0.22
CAPN1-213ENST00000527897 TGFBR3Q03167 851 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 LGALS3BPQ08380 585 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 DUSP7Q16829 419 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 ZNF672Q499Z4 452 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-213ENST00000527897 RABL3Q5HYI8 236 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 REP15Q6BDI9 236 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 NANOGP8Q6NSW7 305 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 C6orf89Q6UWU4 347 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 YTHDF3Q7Z739 585 aaKnown RBP13.66□□□□□ -0.22
CAPN1-213ENST00000527897 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 KRTAP1-3Q8IUG1 177 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 LILRB1Q8NHL6 650 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-213ENST00000527897 ZNF417Q8TAU3 575 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 Q96MF0 132 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 ALKBH3Q96Q83 286 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-213ENST00000527897 ZNF587Q96SQ5 575 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-213ENST00000527897 MCHR1Q99705 422 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 ECSITQ9BQ95 431 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 NANOGQ9H9S0 305 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 C12orf10Q9HB07 376 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 SAR1AQ9NR31 198 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 POU2F3Q9UKI9 436 aa13.66□□□□□ -0.22
CAPN1-213ENST00000527897 IGKV1D-42A0A075B6H8 117 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 TRAV36DV7A0A075B6V5 113 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 CPSF4LA6NMK7 179 aaKnown RBP13.65□□□□□ -0.22
CAPN1-213ENST00000527897 FTCDNL1E5RQL4 147 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 AIM2O14862 343 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 OR2T1O43869 369 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 TPST2O60704 377 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 NQO1P15559 274 aaKnown RBP13.65□□□□□ -0.22
CAPN1-213ENST00000527897 ZNF43P17038 809 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 MPGP29372 298 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 GRPRP30550 384 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 PCGF2P35227 344 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 PTH2RP49190 550 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 CDH11P55287 796 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 CDH12P55289 794 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 CLDN17P56750 224 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 C1DQ13901 141 aaKnown RBP13.65□□□□□ -0.22
CAPN1-213ENST00000527897 MAPRE2Q15555 327 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 FAM69AQ5T7M9 428 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 INTS11Q5TA45 600 aaKnown RBP13.65□□□□□ -0.22
CAPN1-213ENST00000527897 FAM91A1Q658Y4 838 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 KLHL17Q6TDP4 642 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 KLHL24Q6TFL4 600 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 TMEM108Q6UXF1 575 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 ABHD12BQ7Z5M8 362 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-213ENST00000527897 NET1Q7Z628 596 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-213ENST00000527897 PATL1Q86TB9 770 aaKnown RBP13.65□□□□□ -0.22
CAPN1-213ENST00000527897 EPHX4Q8IUS5 362 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 SLC30A8Q8IWU4 369 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 LRRC75A-AS1Q8N1F1 130 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 POMGNT2Q8NAT1 580 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 GPR32P1Q8NGA4 272 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 SMAP2Q8WU79 429 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-213ENST00000527897 LRRC58Q96CX6 371 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 MED4Q9NPJ6 270 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 MRGBPQ9NV56 204 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 ARMCX1Q9P291 453 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 SLC25A15Q9Y619 301 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 CAPN7Q9Y6W3 813 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 USF3Q68DE3 2245 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 MTORP42345 2549 aa13.65□□□□□ -0.22
CAPN1-213ENST00000527897 HEATR1Q9H583 2144 aaKnown RBP13.64□□□□□ -0.23
CAPN1-213ENST00000527897 A0A0B4J2E0 115 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 A0A1B0GX12 115 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 ZNF587BE7ETH6 402 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 PDLIM1O00151 329 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 LGI1O95970 557 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 RPS4XP62701 263 aaKnown RBP13.64□□□□□ -0.23
CAPN1-213ENST00000527897 SPOCK1Q08629 439 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 VMACQ2NL98 169 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 SLC22A25Q6T423 547 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 C5orf46Q6UWT4 87 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms