RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PPIBP23284 216 aaKnown RBP12.48□□□□□ -0.41
CAPN1-212ENST00000527887 CD40P25942 277 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 MPGP29372 298 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 CDH11P55287 796 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 NCALDP61601 193 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 PPP2R2BQ00005 443 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 TNK1Q13470 666 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 CEACAM7Q14002 265 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 RGNQ15493 299 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 NRF1Q16656 503 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 GLIPR1L2Q4G1C9 344 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 TMEM225Q6GV28 225 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 ATG4DQ86TL0 474 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-212ENST00000527887 TREML1Q86YW5 311 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 OR9K2Q8NGE7 335 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 OR52N5Q8NH56 324 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 BBS10Q8TAM1 723 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 NEUROG1Q92886 237 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 VPS33AQ96AX1 596 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 SLC7A6OSQ96CW6 309 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-212ENST00000527887 BTBD10Q9BSF8 475 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 PAIP1Q9H074 479 aaKnown RBP12.48□□□□□ -0.41
CAPN1-212ENST00000527887 C12orf10Q9HB07 376 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 A4GALTQ9NPC4 353 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 NDE1Q9NXR1 346 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 PCDHB14Q9Y5E9 798 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 GMEB1Q9Y692 573 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 USF3Q68DE3 2245 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 FREM1Q5H8C1 2179 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 NPIPB7O75200 414 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 CD8AP01732 235 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 ITGA5P08648 1049 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 GKN3PP0CG01 181 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 ETS2P15036 469 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 TTKP33981 857 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 VEZF1Q14119 521 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 OR7A5Q15622 319 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 COQ5Q5HYK3 327 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 ZNF311Q5JNZ3 666 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 TSPO2Q5TGU0 170 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 ZNF544Q6NX49 715 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 SLC22A25Q6T423 547 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 C5orf46Q6UWT4 87 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 AAED1Q7RTV5 226 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-212ENST00000527887 CLIP4Q8N3C7 705 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 CADM2Q8N3J6 435 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 TMEM99Q8N816 258 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 OR9I1Q8NGQ6 314 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 DNAJA3Q96EY1 480 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 ADAD1Q96M93 576 aaKnown RBP12.47□□□□□ -0.41
CAPN1-212ENST00000527887 HS6ST2Q96MM7 605 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 DHRS9Q9BPW9 319 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 SLCO5A1Q9H2Y9 848 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 FKRPQ9H9S5 495 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 MOV10Q9HCE1 1003 aaKnown RBP12.47□□□□□ -0.41
CAPN1-212ENST00000527887 OBP2BQ9NPH6 170 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 SLC17A5Q9NRA2 495 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 SLC7A10Q9NS82 523 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 RASD1Q9Y272 281 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 TLN2Q9Y4G6 2542 aa12.47□□□□□ -0.41
CAPN1-212ENST00000527887 CSPG4Q6UVK1 2322 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 BBIP1A8MTZ0 92 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 C5orf58C9J3I9 102 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 OR2T1O43869 369 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 AKR7A3O95154 331 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 WNT11O96014 354 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 BMP4P12644 408 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 COX4I1P13073 169 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 PRKAR1BP31321 381 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 CDKN1AP38936 164 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 ZNF83P51522 516 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 DSCR9P59020 149 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 PRPS1P60891 318 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 CYLC2Q14093 348 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-212ENST00000527887 GTDC1Q4AE62 458 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 DNAL1Q4LDG9 190 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 LRIF1Q5T3J3 769 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 C1orf140Q5VVS0 124 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 BLOC1S3Q6QNY0 202 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 FBXL14Q8N1E6 418 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 ARHGAP24Q8N264 748 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 ZIC4Q8N9L1 334 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 WDR31Q8NA23 367 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 OR52E4Q8NGH9 312 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 MFSD8Q8NHS3 518 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 C3orf49Q96BT1 292 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 AURKBQ96GD4 344 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-212ENST00000527887 RAB3IPQ96QF0 476 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-212ENST00000527887 SPATA5L1Q9BVQ7 753 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 REG4Q9BYZ8 158 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 EVA1AQ9H8M9 152 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 CBLN4Q9NTU7 201 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 TAS2R1Q9NYW7 299 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 POU2F3Q9UKI9 436 aa12.46□□□□□ -0.41
CAPN1-212ENST00000527887 RRP15Q9Y3B9 282 aaKnown RBP12.46□□□□□ -0.41
CAPN1-212ENST00000527887 JMJD1CQ15652 2540 aa12.46□□□□□ -0.42
CAPN1-212ENST00000527887 PRR14LQ5THK1 2151 aa12.46□□□□□ -0.42
CAPN1-212ENST00000527887 FN1P02751 2386 aaKnown RBP12.45□□□□□ -0.42
CAPN1-212ENST00000527887 TMEM229AB2RXF0 380 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms