RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PRRC2AP48634 2157 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 ROS1P08922 2347 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 IGKV1D-42A0A075B6H8 117 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 TRAV36DV7A0A075B6V5 113 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 M0R3H8 397 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 VEZF1Q14119 521 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 ERICH5Q6P6B1 374 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 ZNF704Q6ZNC4 412 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 C20orf204Q6ZNR8 217 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 AAED1Q7RTV5 226 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 TAAR8Q969N4 342 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 TAMM41Q96BW9 452 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 ZNF583Q96ND8 569 aa23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 ZNF385AQ96PM9 386 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 ESRP2Q9H6T0 727 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 BEX4Q9NWD9 120 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-217ENST00000527644 MAP1AP78559 2803 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 CIB4A0PJX0 185 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 OR5H1A6NKK0 313 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 CCT8L1PA6NM43 557 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 CD247P20963 164 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 PPA1Q15181 289 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 ZNF613Q6PF04 617 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 CREB3L2Q70SY1 520 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 OR6T1Q8NGN1 323 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 OR6S1Q8NH40 331 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 RCN3Q96D15 328 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 EPYCQ99645 322 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 SLC7A10Q9NS82 523 aa23.23■■□□□ 1.31
TSPAN4-217ENST00000527644 PDLIM1O00151 329 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 AIM2O14862 343 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 RAD51DO75771 328 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 CDH12P55289 794 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 MFSD13AQ14CX5 517 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 NPTX1Q15818 432 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 NCMAPQ5T1S8 102 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 TSPO2Q5TGU0 170 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 OR7E24Q6IFN5 339 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 SEZ6L2Q6UXD5 910 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 SPATA21Q7Z572 469 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 POU5F2Q8N7G0 328 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 POMGNT2Q8NAT1 580 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 PIGTQ969N2 578 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 B3GALT5Q9Y2C3 310 aa23.22■■□□□ 1.31
TSPAN4-217ENST00000527644 PLAUP00749 431 aa23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 ITGA5P08648 1049 aa23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 CRYBA2P53672 197 aa23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 EPHX4Q8IUS5 362 aa23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 P3H2Q8IVL5 708 aa23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 MUS81Q96NY9 551 aa23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 PIP5K1AQ99755 562 aa23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 ELAC2Q9BQ52 826 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 TMEM43Q9BTV4 400 aa23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 SLCO5A1Q9H2Y9 848 aa23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 AP3M1Q9Y2T2 418 aa23.21■■□□□ 1.31
TSPAN4-217ENST00000527644 CD3EP07766 207 aa23.2■■□□□ 1.3
TSPAN4-217ENST00000527644 COX4I1P13073 169 aa23.2■■□□□ 1.3
TSPAN4-217ENST00000527644 GABRA6Q16445 453 aa23.2■■□□□ 1.3
TSPAN4-217ENST00000527644 ENTPD8Q5MY95 495 aa23.2■■□□□ 1.3
TSPAN4-217ENST00000527644 H1FNTQ75WM6 255 aaPredicted RBP23.2■■□□□ 1.3
TSPAN4-217ENST00000527644 OR4D11Q8NGI4 311 aa23.2■■□□□ 1.3
TSPAN4-217ENST00000527644 VANGL1Q8TAA9 524 aaPredicted RBP23.2■■□□□ 1.3
TSPAN4-217ENST00000527644 OXGR1Q96P68 337 aa23.2■■□□□ 1.3
TSPAN4-217ENST00000527644 RNF115Q9Y4L5 304 aa23.2■■□□□ 1.3
TSPAN4-217ENST00000527644 CORINQ9Y5Q5 1042 aa23.2■■□□□ 1.3
TSPAN4-217ENST00000527644 OR6C65A6NJZ3 312 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 FAM220BPB1ANY3 271 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 M0R082 166 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 CHP2O43745 196 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 IFNA14P01570 189 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 ZNF43P17038 809 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 MPGP29372 298 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 GRPRP30550 384 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 SEC24CP53992 1094 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 FOXG1P55316 489 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 TGFBR3Q03167 851 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 LINC00114Q6XXX2 140 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 ABHD12BQ7Z5M8 362 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 ARPINQ7Z6K5 226 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 RBM45Q8IUH3 476 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 KDM8Q8N371 416 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 ADPRHL1Q8NDY3 354 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 C1orf162Q8NEQ5 155 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 ZNF417Q8TAU3 575 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 PROX1Q92786 737 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 ZNF587Q96SQ5 575 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 CCL19Q99731 98 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 AMBRA1Q9C0C7 1298 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 PCDHAC1Q9H158 963 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 SEC14L4Q9UDX3 406 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 BAG5Q9UL15 447 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 USP22Q9UPT9 525 aa23.19■■□□□ 1.3
TSPAN4-217ENST00000527644 RAI1Q7Z5J4 1906 aaPredicted RBP23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 LOC102725191A0A1B0GVB3 256 aa23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 DPRXA6NFQ7 191 aa23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 CPSF4LA6NMK7 179 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 HS3ST1O14792 307 aa23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 ADAM5Q6NVV9 412 aa23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 OR2T12Q8NG77 320 aa23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 ADAMTS16Q8TE57 1224 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms