RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 GPR85P60893 370 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 RAC1P63000 192 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 SMAD2Q15796 467 aaKnown RBP6.77□□□□□ -1.33
CTNND1-216ENST00000527467 ACSM3Q53FZ2 586 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 SCGB1D4Q6XE38 83 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 C17orf107Q6ZR85 190 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 WDR5BQ86VZ2 330 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 RHOXF1Q8NHV9 184 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 PSMF1Q92530 271 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 FAM131CQ96AQ9 280 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 NUS1Q96E22 293 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 SEC22AQ96IW7 307 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 KREMEN1Q96MU8 473 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 KCNA7Q96RP8 456 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 GPR22Q99680 433 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 NUDT22Q9BRQ3 303 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 CHRDQ9H2X0 955 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 ZNF160Q9HCG1 818 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 RASD1Q9Y272 281 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 FCF1Q9Y324 198 aaKnown RBP6.77□□□□□ -1.33
CTNND1-216ENST00000527467 TCRBV7S2A1N4TA0A589 114 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 OR5K3A6NET4 321 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 M0R1X1 148 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 EMC8O43402 210 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 SULT1A3P0DMM9 295 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 SULT1A4P0DMN0 295 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 TIMP2P16035 220 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 TGM1P22735 817 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 TNFSF4P23510 183 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 TNFSF8P32971 234 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 TNFRSF4P43489 277 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 TUSC1Q2TAM9 212 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 TTC32Q5I0X7 151 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 FOXR2Q6PJQ5 311 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 Q6ZRG5 221 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 NDUFAF7Q7L592 441 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 NECAP1Q8NC96 275 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 LOXL4Q96JB6 756 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 FEVQ99581 238 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 DERL2Q9GZP9 239 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 TAF9BQ9HBM6 251 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 GKN1Q9NS71 199 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 SLC6A14Q9UN76 642 aa6.77□□□□□ -1.33
CTNND1-216ENST00000527467 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-216ENST00000527467 FAM24AA6NFZ4 105 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 SCO2O43819 266 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 DBHP09172 617 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 ACSM4P0C7M7 580 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 GLB1P16278 677 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 ENPP1P22413 925 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 PLA2G5P39877 138 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 GPR4P46093 362 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 GAB1Q13480 694 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 SQSTM1Q13501 440 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 KCNC3Q14003 757 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 GRM2Q14416 872 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 FXNQ16595 210 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 LPAL2Q16609 132 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 OPN5Q6U736 354 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 UNC5DQ6UXZ4 953 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 C1orf210Q8IVY1 113 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 SPEM1Q8N4L4 309 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 GATSQ8NAP1 163 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 CLRN3Q8NCR9 226 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 OR10G3Q8NGC4 313 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 DCBLD2Q96PD2 775 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 FCRL5Q96RD9 977 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 NMES1Q9C002 83 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 WWTR1Q9GZV5 400 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 OSGIN1Q9UJX0 560 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 TRAV34A0A0B4J273 112 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 FAM166BA8MTA8 275 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 GPR39O43194 453 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 VEGFDO43915 354 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 ADH4P08319 380 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 NQO2P16083 231 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 EMP2P54851 167 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 MLF1P58340 268 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 PLCXD2Q0VAA5 305 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 RUNX3Q13761 415 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 TP53I3Q53FA7 332 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 PLAG1Q6DJT9 500 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 FAM180BQ6P0A1 224 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 LRRTM4Q86VH4 590 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 PLD4Q96BZ4 506 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 DNAJA3Q96EY1 480 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 ACO2Q99798 780 aaKnown RBP6.76□□□□□ -1.33
CTNND1-216ENST00000527467 ANKRD60Q9BZ19 345 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 NXF5Q9H1B4 397 aaKnown RBP6.76□□□□□ -1.33
CTNND1-216ENST00000527467 SLC25A18Q9H1K4 315 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 ZNF355PQ9NSJ1 428 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 RBFOX1Q9NWB1 397 aaKnown RBP6.76□□□□□ -1.33
CTNND1-216ENST00000527467 INTS6Q9UL03 887 aaKnown RBP6.76□□□□□ -1.33
CTNND1-216ENST00000527467 PCDHB10Q9UN67 800 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 STRAPQ9Y3F4 350 aaKnown RBP6.76□□□□□ -1.33
CTNND1-216ENST00000527467 GOLGA4Q13439 2230 aaKnown RBP6.76□□□□□ -1.33
CTNND1-216ENST00000527467 UBR2Q8IWV8 1755 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 ZNF320A2RRD8 509 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 OR5K4A6NMS3 321 aa6.76□□□□□ -1.33
CTNND1-216ENST00000527467 B4E171 279 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms